CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gmeb-2
(
Caenorhabditis elegans
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
IPR000770
WBGene00010010
T322111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F53H4.5
SAND
1
62
MVTKLFTCPGIHQNCILIDGETEYISPKEFTVRANKDKQKDWKGSIRIGKSNLRTLMEMRSL
Links
Other
SAND
family TFs
Other
Caenorhabditis elegans
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_15895
Ancylostoma caninum
ANCCAN_15895
N
0.951
ANCDUO_01146
Ancylostoma duodenale
ANCDUO_01146
N
0.965
CBG15998
Caenorhabditis briggsae
CBG15998
N
0.974
CBN08978
Caenorhabditis brenneri
CBN08978
N
0.971
CJA01357
Caenorhabditis japonica
CJA01357
N
0.973
CRE16681
Caenorhabditis remanei
CRE16681
N
0.969
HCOI01890300
Haemonchus contortus
HCOI01890300
N
0.960
NBR_0000578501
Nippostrongylus brasiliensis
NBR_0000578501
N
0.846
NECAME_15736
Necator americanus
NECAME_15736
N
0.863
OESDEN_01187
Oesophagostomum dentatum
OESDEN_01187
N
0.849
PPA07067
Pristionchus pacificus
PPA07067
N
0.969
scaffold233-EXSNAP2012.27
Pristionchus exspectatus
scaffold233-EXSNAP2012.27
N
0.875
SMUV_0000604801
Syphacia muris
SMUV_0000604801
N
0.938