gmeb-2 (Caenorhabditis elegans)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 WBGene00010010 T322111_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and metal ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Is expressed in pharynx. Orthologous to human GMEB1 (glucocorticoid modulatory element binding protein 1) and GMEB2 (glucocorticoid modulatory element binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F53H4.5 SAND 1 62

Links

Other SAND family TFs
Other Caenorhabditis elegans TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG15998 Caenorhabditis briggsae CBG15998 N 0.974
CJA01357 Caenorhabditis japonica CJA01357 N 0.973
CBN08978 Caenorhabditis brenneri CBN08978 N 0.971
PPA07067 Pristionchus pacificus PPA07067 N 0.969
CRE16681 Caenorhabditis remanei CRE16681 N 0.969
ANCDUO_01146 Ancylostoma duodenale ANCDUO_01146 N 0.965
HCOI01890300 Haemonchus contortus HCOI01890300 N 0.960
ANCCAN_15895 Ancylostoma caninum ANCCAN_15895 N 0.951
SMUV_0000604801 Syphacia muris SMUV_0000604801 N 0.938
scaffold233-EXSNAP2012.27 Pristionchus exspectatus scaffold233-EXSNAP2012.27 N 0.875
NECAME_15736 Necator americanus NECAME_15736 N 0.863
OESDEN_01187 Oesophagostomum dentatum OESDEN_01187 N 0.849
NBR_0000578501 Nippostrongylus brasiliensis NBR_0000578501 N 0.846