deaf1 (Xenopus tropicalis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 XB-GENE-1216227 T322290_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.986 0.868
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.986 0.868
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002937552 SAND 149 224

Links

Other SAND family TFs
Other Xenopus tropicalis TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013408 Aedes aegypti AAEL013408 I 0.851
Aan_R010721 Calypte anna Aan_R010721 I 0.987
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.987
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I 0.987
BGIBMGA002019 Bombyx mori BGIBMGA002019 I 0.881
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.886
Brh_R009745 Buceros rhinoceros Brh_R009745 I 0.966
CapteG228571 Capitella teleta CapteG228571 I 0.929
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I 0.847
CGI_10012910 Crassostrea gigas CGI_10012910 I 0.922
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I 0.985
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.856
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.856
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.988
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.984
ENSAMXG00000016516 Astyanax mexicanus ENSAMXG00000016516 I 0.958
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.988
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.984
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.985
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.985
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I 0.986
deaf1 Danio rerio ENSDARG00000088844 I 0.968
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.984
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.983
DEAF1 Equus caballus ENSECAG00000010151 I 0.986
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.987
DEAF1 Felis catus ENSFCAG00000007591 I 0.984
DEAF1 Homo sapiens ENSG00000177030 I 0.986
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I 0.944
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.988
DEAF1 Gorilla gorilla ENSGGOG00000014020 I 0.986
ENSGMOG00000000222 Gadus morhua ENSGMOG00000000222 I 0.953
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I 0.983
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.985
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I 0.972
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I 0.983
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.988
DEAF1 Microcebus murinus ENSMICG00000001602 I 0.980
DEAF1 Myotis lucifugus ENSMLUG00000026576 I 0.986
DEAF1 Macaca mulatta ENSMMUG00000002660 I 0.986
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.984
Deaf1 Mus musculus ENSMUSG00000058886 I 0.985
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I 0.986
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.985
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.981
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I 0.959
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.984
deaf1 Oryzias latipes ENSORLG00000019407 I 0.943
ENSP00000371846 Macaca fascicularis ENSP00000371846 I 0.986
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.985
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I 0.986
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I 0.959
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.972
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I 0.985
DEAF1 Pan troglodytes ENSPTRG00000003129 D 0.986
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.982
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.985
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I 0.983
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.984
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.985
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.987
deaf1 Tetraodon nigroviridis ENSTNIG00000016068 I 0.950
deaf1 Takifugu rubripes ENSTRUG00000002931 I 0.946
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.985
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I 0.959
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I 0.868
fgenesh2_pg.scaffold_59000072 Branchiostoma floridae fgenesh2_pg.scaffold_59000072 I 0.868
GB41654 Apis mellifera GB41654 I 0.855
Gfo_R011899 Geospiza fortis Gfo_R011899 I 0.987
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.870
HMEL013517 Heliconius melpomene HMEL013517 I 0.884
ISCW003915 Ixodes scapularis ISCW003915 I 0.879
KGM_18605 Danaus plexippus KGM_18605 I 0.884
L798_01684 Zootermopsis nevadensis L798_01684 I 0.901
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.884
LotgiG168359 Lottia gigantea LotgiG168359 I 0.892
MCINX013640 Melitaea cinxia MCINX013640 I 0.881
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I 0.986
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I 0.868
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.988
PHUM581340 Pediculus humanus PHUM581340 I 0.861
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.988
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I 0.905
SMAR003119 Strigamia maritima SMAR003119 I 0.855
TC000085 Tribolium castaneum TC000085 I 0.896
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.884