Bra003305 (Brassica rapa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bra003305 T322457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL15
M07263_2.00 		Arabidopsis thaliana
DNWNTGTACGGAHN
NDTCCGTACANWNH		 Dap-seq
OMalley et al.(2016)
SPL15_col_a 		0.981 0.971
SPL15
M07264_2.00 		Arabidopsis thaliana
DNTGTACGGAHNNNN
NNNNDTCCGTACANH		 Dap-seq
OMalley et al.(2016)
SPL15_colamp_a 		0.981 0.971
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003305.1-P SBP 59 126

Links

Other SBP family TFs
Other Brassica rapa TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05801 Capronia coronata A1O1_05801 I 0.000
A1O3_03555 Capronia epimyces A1O3_03555 I 0.000
A1O5_06619 Cladophialophora psammophila A1O5_06619 I 0.000
A1O7_00849 Cladophialophora yegresii A1O7_00849 I 0.000
AB07639.1 Alternaria brassicicola AB07639.1 I 0.000
BDDG_02608 Blastomyces dermatitidis BDDG_02608 I 0.000
ACLA_026280 Aspergillus clavatus CADACLAG00002102 I 0.000
AFUA_1G09190 Aspergillus fumigatus CADAFUAG00007026 I 0.000
CADANGAG00006390 Aspergillus niger CADANGAG00006390 I 0.000
ANIA_01368 Aspergillus nidulans CADANIAG00001243 D 0.000
CPC735_034820 Coccidioides posadasii CPC735_034820 I 0.000
EURHEDRAFT_506166 Aspergillus ruber EURHEDRAFT_506166 I 0.000
G647_00903 Cladophialophora carrionii G647_00903 I 0.000
HCBG_05364 Histoplasma capsulatum HCBG_05364 I 0.000
HMPREF1120_02804 Exophiala dermatitidis HMPREF1120_02804 I 0.000
HMPREF1541_00475 Cyphellophora europaea HMPREF1541_00475 I 0.000
LEMA_P054920.1 Leptosphaeria maculans LEMA_P054920.1 I 0.000
PABG_06647 Paracoccidioides brasiliensis PABG_06647 I 0.000
Pc16g02310 Penicillium chrysogenum Pc16g02310 I 0.000
PCH_Pc16g02310 Penicillium rubens PCH_Pc16g02310 I 0.000
PDE_06784 Penicillium oxalicum PDE_06784 I 0.000
PDIP_41390 Penicillium digitatum PDIP_41390 I 0.000
PMAA_045800 Talaromyces marneffei PMAA_045800 I 0.000
PMAA_045800 Penicillium marneffei PMAA_045800 I 0.000
PV04_01175 Capronia semiimmersa PV04_01175 I 0.000
PV05_11903 Exophiala xenobiotica PV05_11903 N 0.000
PV07_02125 Cladophialophora immunda PV07_02125 I 0.000
PV08_05229 Exophiala spinifera PV08_05229 I 0.000
PVAR5_4509 Byssochlamys spectabilis PVAR5_4509 I 0.000
SETTUDRAFT_97479 Setosphaeria turcica SETTUDRAFT_97479 I 0.000
UREG_05754 Uncinocarpus reesii UREG_05754 I 0.000
Z517_07725 Fonsecaea pedrosoi Z517_07725 I 0.000
Z519_09046 Cladophialophora bantiana Z519_09046 I 0.000