SPL15 (Arabidopsis thaliana)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 AT3G57920 T322397_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SPL15
M07263_2.00
Arabidopsis thaliana
DNWNTGTACGGAHN

NDTCCGTACANWNH
Dap-seq
OMalley et al.(2016)
SPL15_col_a
(Direct) (Direct)
SPL15
M07264_2.00
Arabidopsis thaliana
DNTGTACGGAHNNNN

NNNNDTCCGTACANH
Dap-seq
OMalley et al.(2016)
SPL15_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G57920.1 SBP 59 133

Links

Other SBP family TFs
Other Arabidopsis thaliana TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SPL15 Arabidopsis lyrata fgenesh2_kg.5__2235__AT3G57920.1 I 0.986
Carubv10017540m.g Capsella rubella Carubv10017540m.g I 0.985
Bo4g109710 Brassica oleracea Bo4g109710 I 0.985
Cagra.0686s0010 Capsella grandiflora Cagra.0686s0010 I 0.985
Bo6g073290 Brassica oleracea Bo6g073290 I 0.985
Bostr.20903s0043 Boechera stricta Bostr.20903s0043 I 0.985
Bostr.20903s0042 Boechera stricta Bostr.20903s0042 I 0.985
Bra003305 Brassica rapa Bra003305 I 0.981
Bra014599 Brassica rapa Bra014599 I 0.972
Thhalv10006058m.g Eutrema salsugineum Thhalv10006058m.g I 0.966
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.927
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.927
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.919
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.918
Thhalv10016816m.g Eutrema salsugineum Thhalv10016816m.g I 0.891