Si013870m.g (Setaria italica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Si013870m.g T323046_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.941 0.747
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.924 0.680
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.917 0.680
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.917 0.680
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.917 0.680
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.897 0.667
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.889 0.653
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.888 0.640
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.888 0.640
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.888 0.640
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.888 0.640
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si013870m SBP 92 166

Links

Other SBP family TFs
Other Setaria italica TFs

284 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001674 Calypte anna Aan_R001674 I
Alligator_sinensis_CCG004420.1 Alligator sinensis Alligator_sinensis_CCG004420.1 I
Brh_R003425 Buceros rhinoceros Brh_R003425 I
Cmyd_10012311 Chelonia mydas Cmyd_10012311 I
ZBTB1 Anolis carolinensis ENSACAG00000015782 I
ENSAMEG00000019557 Ailuropoda melanoleuca ENSAMEG00000019557 I
ENSAPLG00000001073 Anas platyrhynchos ENSAPLG00000001073 I
ZBTB1 Bos taurus ENSBTAG00000040551 I
ZBTB1 Canis familiaris ENSCAFG00000016030 I
ZBTB1 Callithrix jacchus ENSCJAG00000019591 I
ZBTB1 Cavia porcellus ENSCPOG00000011379 I
ZBTB1 Dasypus novemcinctus ENSDNOG00000015051 I
ZBTB1 Felis catus ENSFCAG00000031472 I
ZBTB1 Homo sapiens ENSG00000126804 I
ZBTB1 Gorilla gorilla ENSGGOG00000016483 I
ENSLACG00000016384 Latimeria chalumnae ENSLACG00000016384 I
ZBTB1 Loxodonta africana ENSLAFG00000018528 I
ZBTB1 Meleagris gallopavo ENSMGAG00000015392 I
ZBTB1 Myotis lucifugus ENSMLUG00000016560 I
ZBTB1 Monodelphis domestica ENSMODG00000023946 I
Zbtb1 Mus musculus ENSMUSG00000033454 D
ENSNLEG00000014246 Nomascus leucogenys ENSNLEG00000014246 I
ENSOARG00000001006 Ovis aries ENSOARG00000001006 I
ZBTB1 Oryctolagus cuniculus ENSOCUG00000011740 I
ZBTB1 Otolemur garnettii ENSOGAG00000016795 I
ZBTB1 Ochotona princeps ENSOPRG00000010400 I
ENSP00000378201 Macaca fascicularis ENSP00000378201 I
ENSP00000378201-D1 Bos grunniens ENSP00000378201-D1 I
ZBTB1 Pan troglodytes ENSPTRG00000006438 I
ZBTB1 Pteropus vampyrus ENSPVAG00000017582 I
ENSSHAG00000010188 Sarcophilus harrisii ENSSHAG00000010188 I
ZBTB1 Sus scrofa ENSSSCG00000023724 I
ENSSTOG00000028335 Ictidomys tridecemlineatus ENSSTOG00000028335 I
ZBTB1 Taeniopygia guttata ENSTGUG00000012931 I
ZBTB1 Tursiops truncatus ENSTTRG00000000531 I
ZBTB1 Vicugna pacos ENSVPAG00000004877 I
Gfo_R006806 Geospiza fortis Gfo_R006806 I
Ogr05927 Ophisaurus gracilis Ogr05927 I
Pvit_18915 Pogona vitticeps Pvit_18915 I
Tal_R000310 Tyto alba Tal_R000310 I