CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10012311
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10012311
T134371_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb1
M00775_2.00
Mus musculus
NHMMCGCRHN
NDYGCGKKDN
PBM
Weirauch et al.(2013)
pTH2366
0.775
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10012311
C2H2 ZF
532
553
FRCPNCGQRFETETLVVEHMSN
Cmyd_10012311
C2H2 ZF
572
598
HRRKHFCNLCGKGFYQRCHLREHYTVH
Cmyd_10012311
C2H2 ZF
604
626
FVCQTCGKQFLRERQLRLHNDMH
Cmyd_10012311
C2H2 ZF
660
682
TICQVCFQIFPNNEQLEQHMDVH
Cmyd_10012311
C2H2 ZF
684
707
YTCGVCGAKFNLRKDMRSHYNAKH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000001073
Anas platyrhynchos
ENSAPLG00000001073
I
0.781
ZBTB1
Meleagris gallopavo
ENSMGAG00000015392
I
0.781
ZBTB1
Taeniopygia guttata
ENSTGUG00000012931
I
0.781
Afo_R011034
Aptenodytes forsteri
Afo_R011034
I
0.781
Alligator_sinensis_CCG004420.1
Alligator sinensis
Alligator_sinensis_CCG004420.1
I
0.781
Brh_R003425
Buceros rhinoceros
Brh_R003425
I
0.781
Gfo_R006806
Geospiza fortis
Gfo_R006806
I
0.781
Tal_R000310
Tyto alba
Tal_R000310
I
0.781
ZBTB1
Ochotona princeps
ENSOPRG00000010400
I
0.778
Pvit_18915
Pogona vitticeps
Pvit_18915
I
0.777
ZBTB1
Anolis carolinensis
ENSACAG00000015782
I
0.775
ENSAMEG00000019557
Ailuropoda melanoleuca
ENSAMEG00000019557
I
0.775
ZBTB1
Canis familiaris
ENSCAFG00000016030
I
0.775
ZBTB1
Callithrix jacchus
ENSCJAG00000019591
I
0.775
ZBTB1
Cavia porcellus
ENSCPOG00000011379
I
0.775
ZBTB1
Dasypus novemcinctus
ENSDNOG00000015051
I
0.775
ZBTB1
Felis catus
ENSFCAG00000031472
I
0.775
ZBTB1
Homo sapiens
ENSG00000126804
I
0.775
ZBTB1
Gorilla gorilla
ENSGGOG00000016483
I
0.775
ZBTB1
Loxodonta africana
ENSLAFG00000018528
I
0.775
ZBTB1
Myotis lucifugus
ENSMLUG00000016560
I
0.775
Zbtb1
Mus musculus
ENSMUSG00000033454
D
0.775
ENSNLEG00000014246
Nomascus leucogenys
ENSNLEG00000014246
I
0.775
ZBTB1
Otolemur garnettii
ENSOGAG00000016795
I
0.775
ZBTB1
Pan troglodytes
ENSPTRG00000006438
I
0.775
ZBTB1
Pteropus vampyrus
ENSPVAG00000017582
I
0.775
ZBTB1
Sus scrofa
ENSSSCG00000023724
I
0.775
ENSSTOG00000028335
Ictidomys tridecemlineatus
ENSSTOG00000028335
I
0.775
ZBTB1
Tursiops truncatus
ENSTTRG00000000531
I
0.775
ZBTB1
Vicugna pacos
ENSVPAG00000004877
I
0.775
ENSP00000378201
Macaca fascicularis
ENSP00000378201
I
0.775
ZBTB1
Monodelphis domestica
ENSMODG00000023946
I
0.774
ZBTB1
Oryctolagus cuniculus
ENSOCUG00000011740
I
0.774
ENSSHAG00000010188
Sarcophilus harrisii
ENSSHAG00000010188
I
0.774
Aan_R001674
Calypte anna
Aan_R001674
I
0.773
ZBTB1
Bos taurus
ENSBTAG00000040551
I
0.771
ENSOARG00000001006
Ovis aries
ENSOARG00000001006
I
0.771
ENSP00000378201-D1
Bos grunniens
ENSP00000378201-D1
I
0.771
ENSLACG00000016384
Latimeria chalumnae
ENSLACG00000016384
I
0.758