PGSC0003DMG400025465 (Solanum tuberosum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 PGSC0003DMG400025465 T323941_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400065481 Sigma 70 310 380
PGSC0003DMT400065483 Sigma 70 322 392

Links

Other Sigma 70 family TFs
Other Solanum tuberosum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013989 Ailuropoda melanoleuca ENSAMEG00000013989 N
ZSCAN2 Bos taurus ENSBTAG00000001385 N
ZSCAN2 Canis familiaris ENSCAFG00000012858 N
ZSCAN2 Choloepus hoffmanni ENSCHOG00000006276 N
ZSCAN2 Callithrix jacchus ENSCJAG00000016119 N
ENSCPOG00000008991 Cavia porcellus ENSCPOG00000008991 N
ENSCSAG00000017237 Chlorocebus sabaeus ENSCSAG00000017237 N
ZSCAN2 Dasypus novemcinctus ENSDNOG00000033566 N
ZSCAN2 Equus caballus ENSECAG00000022470 N
ZSCAN2 Erinaceus europaeus ENSEEUG00000006493 N
ZSCAN2 Felis catus ENSFCAG00000025011 N
ZSCAN2 Homo sapiens ENSG00000176371 N
ZSCAN2 Gorilla gorilla ENSGGOG00000014609 N
ZSCAN2 Loxodonta africana ENSLAFG00000001521 N
ENSMICG00000015919 Microcebus murinus ENSMICG00000015919 N
ZSCAN2 Macaca mulatta ENSMMUG00000022080 N
ZSCAN2 Monodelphis domestica ENSMODG00000019354 N
ENSMPUG00000015626 Mustela putorius furo ENSMPUG00000015626 N
Zscan2 Mus musculus ENSMUSG00000038797 N
ENSNLEG00000011329 Nomascus leucogenys ENSNLEG00000011329 N
ENSOARG00000013148 Ovis aries ENSOARG00000013148 N
ZSCAN2 Oryctolagus cuniculus ENSOCUG00000007308 N
ZSCAN2 Otolemur garnettii ENSOGAG00000007268 N
ZSCAN2 Ochotona princeps ENSOPRG00000002700 N
ENSP00000325123 Macaca fascicularis ENSP00000325123 N
ENSPANG00000000536 Papio anubis ENSPANG00000000536 N
ENSPPYG00000006877 Pongo abelii ENSPPYG00000006877 N
ZSCAN2 Pan troglodytes ENSPTRG00000007400 N
Zscan2 Rattus norvegicus ENSRNOG00000022164 N
ZSCAN2 Sorex araneus ENSSARG00000014372 N
ENSSHAG00000015790 Sarcophilus harrisii ENSSHAG00000015790 N
ENSSTOG00000001741 Ictidomys tridecemlineatus ENSSTOG00000001741 N
ENSTSYG00000009785 Tarsius syrichta ENSTSYG00000009785 N
Myotis_brandtii_ZSCAN2_10013218 Myotis brandtii Myotis_brandtii_ZSCAN2_10013218 N