Phatr3_J17029 (Phaeodactylum tricornutum)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 Phatr3_J17029 T323948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J17029.p1 Sigma 70 201 271

Links

Other Sigma 70 family TFs
Other Phaeodactylum tricornutum TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_108010 Albugo laibachii ALNC14_108010 N
estExt_Genewise1Plus.C_120108 Phytophthora capsici estExt_Genewise1Plus.C_120108 N
F443_17044 Phytophthora parasitica F443_17044 N
fgenesh_scip_prom.28083.2008 Phytophthora lateralis fgenesh_scip_prom.28083.2008 N
fgenesh_scip_prom.46568.8647 Phytophthora kernoviae fgenesh_scip_prom.46568.8647 N
maker-pag1_scaffold_1-snap-gene-0.41 Pythium aphanidermatum maker-pag1_scaffold_1-snap-gene-0.41 N
maker-par_contig_197-snap-gene-0.17 Pythium arrhenomanes maker-par_contig_197-snap-gene-0.17 N
maker-pir_contig_825-snap-gene-0.6 Pythium irregulare maker-pir_contig_825-snap-gene-0.6 N
maker-piw_contig_2350-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_2350-fgenesh-gene-0.0 N
maker-pve_contig_708-snap-gene-0.10 Pythium vexans maker-pve_contig_708-snap-gene-0.10 N
Phyra79954 Phytophthora ramorum Phyra79954 N
PITG_06978 Phytophthora infestans PITG_06978 N
PYU1_G014014 Pythium ultimum PYU1_G014014 N