CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra79954
(
Phytophthora ramorum
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
Phyra79954
T162159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra79954
CENPB
36
83
LNDKQRVEIIQIAENSKISKRQLAERFGVSEAAIRKLLLQKDDVLKRY
Links
Other
CENPB
family TFs
Other
Phytophthora ramorum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.2008
Phytophthora lateralis
fgenesh_scip_prom.28083.2008
N
1.000
fgenesh_scip_prom.46568.8647
Phytophthora kernoviae
fgenesh_scip_prom.46568.8647
N
0.889
PYU1_G014014
Pythium ultimum
PYU1_G014014
N
0.867
maker-pir_contig_825-snap-gene-0.6
Pythium irregulare
maker-pir_contig_825-snap-gene-0.6
N
0.867
maker-pve_contig_708-snap-gene-0.10
Pythium vexans
maker-pve_contig_708-snap-gene-0.10
N
0.844
maker-piw_contig_2350-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2350-fgenesh-gene-0.0
N
0.844
Physo138756
Phytophthora sojae
Physo138756
N
0.830
maker-par_contig_197-snap-gene-0.17
Pythium arrhenomanes
maker-par_contig_197-snap-gene-0.17
N
0.822
maker-pag1_scaffold_1-snap-gene-0.41
Pythium aphanidermatum
maker-pag1_scaffold_1-snap-gene-0.41
N
0.822
ALNC14_108010
Albugo laibachii
ALNC14_108010
N
0.778
estExt_Genewise1Plus.C_120108
Phytophthora capsici
estExt_Genewise1Plus.C_120108
N
0.723
F443_17044
Phytophthora parasitica
F443_17044
N
0.723