CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc09g008040.2
(
Solanum lycopersicum
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
Solyc09g008040.2
T323999_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g008040.2.1
Sigma 70
327
397
LINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRT
Links
Other
Sigma 70
family TFs
Other
Solanum lycopersicum
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R003159
Aptenodytes forsteri
Afo_R003159
N
Brh_R000694
Buceros rhinoceros
Brh_R000694
N
Gfo_R003548
Geospiza fortis
Gfo_R003548
N
Tal_R002098
Tyto alba
Tal_R002098
N