CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R003548
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R003548
T135694_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R003548
C2H2 ZF
3
27
YVCDYEGCGKGFTRDFHRARHLLTH
Gfo_R003548
C2H2 ZF
33
58
FECTTEGCNEKFGTKSNMKKHIERKH
Gfo_R003548
C2H2 ZF
65
89
YVCDFEGCNKSFKKHQQLKVHQCHH
Gfo_R003548
C2H2 ZF
95
119
FKCNKEGCGKCFSTPSRLKRHEKIH
Gfo_R003548
C2H2 ZF
122
147
YACKKENCSYIGKTWTELLKHNKVSH
Gfo_R003548
C2H2 ZF
151
173
IVCSECNKTFKRKDYLKQHQKTH
Gfo_R003548
C2H2 ZF
180
205
YCCPREGCGRTYTTLFNLQSHILSFH
Gfo_R003548
C2H2 ZF
211
235
FACDYPGCGKVFAMKQSLARHAVVH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSFALG00000008614
Ficedula albicollis
ENSFALG00000008614
N
0.813
Afo_R003159
Aptenodytes forsteri
Afo_R003159
N
0.799
Brh_R000694
Buceros rhinoceros
Brh_R000694
N
0.797
Tal_R002098
Tyto alba
Tal_R002098
N
0.771