cassava18263.valid.m1 (Manihot esculenta)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 cassava18263.valid.m1 T324090_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18263.valid.m1 Sigma 70 306 376

Links

Other Sigma 70 family TFs
Other Manihot esculenta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I
CAGL0L01771g Candida glabrata CAGL0L01771g I
CaO19.610 Candida albicans CaO19.610 I
CaO19.8243 Candida albicans CaO19.8243 I
CD36_33560 Candida dubliniensis CD36_33560 I
CLUG_02047 Candida lusitaniae CLUG_02047 I
CLUG_02047 Clavispora lusitaniae CLUG_02047 I
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I
CPAG_00178 Candida parapsilosis CPAG_00178 I
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I
G210_4810 Candida maltosa G210_4810 I
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I
JL09_g3139 Pichia kudriavzevii JL09_g3139 I
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I
Kpol_460p25 Vanderwaltozyma polyspora Kpol_460p25 I
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I
Kwal_8176 Kluyveromyces waltii Kwal_8176 I
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I
LELG_05390 Lodderomyces elongisporus LELG_05390 I
NDAI_0K01760 Naumovozyma dairenensis NDAI_0K01760 I
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I
PGUG_03651 Candida guilliermondii PGUG_03651 I
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I
PICST_67427 Scheffersomyces stipitis PICST_67427 I
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I
SU7_2504 Saccharomyces arboricola SU7_2504 I
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I
XP_002490663.1 Pichia pastoris XP_002490663.1 I
YALI0_D01573g Yarrowia lipolytica YALI0_D01573g I
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I