CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_014_00805
(
Aquilegia coerulea
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04542 (Sigma70_r2)
IPR007627
Aquca_014_00805
T324144_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_014_00805.1
Sigma 70
206
276
IIISYRRLVVSIATGYQGKGLSLQDLIQEGSIGLLLGAEKFDPKKGYKLSTYAYWWIKQAIIRAIANKSRL
Links
Other
Sigma 70
family TFs
Other
Aquilegia coerulea
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm9858
Brugia malayi
Bm9858
N
0.000
BTMF_0001276701
Brugia timori
BTMF_0001276701
N
0.000
LOAG_06904
Loa loa
LOAG_06904
N
0.000
nAv.1.0.1.g02807
Acanthocheilonema viteae
nAv.1.0.1.g02807
N
0.000
nLs.2.1.2.g01322
Litomosoides sigmodontis
nLs.2.1.2.g01322
N
0.000
nOo.2.0.1.g04260
Onchocerca ochengi
nOo.2.0.1.g04260
N
0.000
OFLC_0001223401
Onchocerca flexuosa
OFLC_0001223401
N
0.000
TCLT_0000054001
Thelazia callipaeda
TCLT_0000054001
N
0.000
WBGene00246010
Onchocerca volvulus
WBGene00246010
N
0.000