Aqu1.229822 (Amphimedon queenslandica)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 Aqu1.229822 T324384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.745 0.745
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.745 0.745
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.745 0.745
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.745 0.745
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.745 0.745
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.745 0.745
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.735 0.735
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.735 0.735
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.735 0.735
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.735 0.735
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PAC:15728350 SMAD 25 126

Links

Other SMAD family TFs
Other Amphimedon queenslandica TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMEC012048 Anopheles melas AMEC012048 N
AMTR_s00047p00130260 Amborella trichopoda AMTR_s00047p00130260 N
ASIM_0002035201 Anisakis simplex ASIM_0002035201 N
augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf46816-processed-gene-0.0 N
Bo5g121420 Brassica oleracea Bo5g121420 N
CLEC006116 Cimex lectularius CLEC006116 N
ENSACAG00000000993 Anolis carolinensis ENSACAG00000000993 N
ENSAMEG00000010603 Ailuropoda melanoleuca ENSAMEG00000010603 N
TBPL2 Choloepus hoffmanni ENSCHOG00000011134 I
TBP Homo sapiens ENSG00000112592 D
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I
GRMZM2G161418 Zea mays GRMZM2G161418 I
MCYG_00725 Microsporum canis MCYG_00725 N
PEQ_0000350901 Parascaris equorum PEQ_0000350901 N
PXEA_0001663701 Protopolystoma xenopodis PXEA_0001663701 N
SBAD_0001092401 Soboliphyme baturini SBAD_0001092401 N
TELCIR_16291 Teladorsagia circumcincta TELCIR_16291 N