smad1 (Takifugu rubripes)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 ENSTRUG00000014344 T325009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.951 0.951
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.951 0.951
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.922 0.922
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.922 0.922
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.922 0.922
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.912 0.912
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.912 0.912
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.892 0.892
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.892 0.892
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.892 0.892
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.892 0.892
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000036665 SMAD 32 133
ENSTRUP00000036666 SMAD 30 131

Links

Other SMAD family TFs
Other Takifugu rubripes TFs

412 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022362 Oryza indica BGIOSGA022362 N
BGIOSGA027003 Oryza indica BGIOSGA027003 N
Ca_17354 Cicer arietinum Ca_17354 N
GLYMA09G05840 Glycine max GLYMA09G05840 N
GLYMA09G05850 Glycine max GLYMA09G05850 N
GLYMA09G05860 Glycine max GLYMA09G05860 N
GLYMA15G17090 Glycine max GLYMA15G17090 N
GLYMA15G17100 Glycine max GLYMA15G17100 N
Gorai.006G249900 Gossypium raimondii Gorai.006G249900 N
Gorai.006G250000 Gossypium raimondii Gorai.006G250000 N
Gorai.006G250100 Gossypium raimondii Gorai.006G250100 N
LPERR06G03670 Leersia perrieri LPERR06G03670 N
MTR_2g438180 Medicago truncatula MTR_2g438180 N
OBART06G03990 Oryza barthii OBART06G03990 N
OBART08G14070 Oryza barthii OBART08G14070 N
OGLUM08G14830 Oryza glumaepatula OGLUM08G14830 N
OMERI06G04590 Oryza meridionalis OMERI06G04590 N
ONIVA03G12480 Oryza nivara ONIVA03G12480 N
ONIVA06G20210 Oryza nivara ONIVA06G20210 N
OPUNC06G03800 Oryza punctata OPUNC06G03800 N
ORGLA06G0037100 Oryza glaberrima ORGLA06G0037100 N
ORUFI06G04020 Oryza rufipogon ORUFI06G04020 N
ORUFI08G15950 Oryza rufipogon ORUFI08G15950 N
PGSC0003DMG400044919 Solanum tuberosum PGSC0003DMG400044919 N