CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_17354
(
Cicer arietinum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ca_17354
T006367_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_17354
AP2
11
63
VKYRGVRKRPWGKYGAEIRDPTKPTGRQWLGTFDTAEEAARAYDCEAIRLRGA
Links
Other
AP2
family TFs
Other
Cicer arietinum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g438180
Medicago truncatula
MTR_2g438180
N
0.843
GLYMA09G05850
Glycine max
GLYMA09G05850
N
0.832
GLYMA09G05860
Glycine max
GLYMA09G05860
N
0.832
GLYMA15G17090
Glycine max
GLYMA15G17090
N
0.813
GLYMA09G05840
Glycine max
GLYMA09G05840
N
0.809
GLYMA15G17100
Glycine max
GLYMA15G17100
N
0.808
LPERR06G03670
Leersia perrieri
LPERR06G03670
N
0.785
BGIOSGA022362
Oryza indica
BGIOSGA022362
N
0.767
OBART06G03990
Oryza barthii
OBART06G03990
N
0.767
OGLUM06G04110
Oryza glumaepatula
OGLUM06G04110
N
0.767
OMERI06G04590
Oryza meridionalis
OMERI06G04590
N
0.767
ONIVA06G20210
Oryza nivara
ONIVA06G20210
N
0.767
ORGLA06G0037100
Oryza glaberrima
ORGLA06G0037100
N
0.767
ORUFI06G04020
Oryza rufipogon
ORUFI06G04020
N
0.767
OPUNC06G03800
Oryza punctata
OPUNC06G03800
N
0.761
OBART08G14070
Oryza barthii
OBART08G14070
N
0.760
ORUFI08G15950
Oryza rufipogon
ORUFI08G15950
N
0.760
BGIOSGA027003
Oryza indica
BGIOSGA027003
N
0.747
OGLUM08G14830
Oryza glumaepatula
OGLUM08G14830
N
0.740
ONIVA03G12480
Oryza nivara
ONIVA03G12480
N
0.734