Ocbimv22036741m.g (Octopus bimaculoides)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Ocbimv22036741m.g T325367_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.790 0.790
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.790 0.790
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.790 0.790
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.790 0.790
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.790 0.790
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.790 0.790
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.790 0.790
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.790 0.790
Mad
M06446_2.00 		Drosophila melanogaster
GYGHCGBCVS
SBGVCGDCRC		 B1H
Zhu et al.(2011)
Mad_FlyReg_FBgn0011648 		0.726 0.726
Mad
M08427_2.00 		Drosophila melanogaster
SNGRCGMSRVSRBNS
SNVYSBYSKCGYCNS		 ChIP-chip
Mathelier et al.(2014)
MA0535.1 		0.726 0.726
Mad
M09692_2.00 		Drosophila melanogaster
KCBGSHGKCGCSNC
GNSGCGMCDSCVGM		 Misc
Kulakovskiy et al.(2009)
Mad 		0.726 0.726
Mad
M11293_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$MAD_Q6 		0.726 0.726
SMAD1
M11286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_01 		0.726 0.726
SMAD1
M11287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD1_Q6 		0.726 0.726
SMAD9
M11274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_01 		0.726 0.726
Smad9
M11290_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_02 		0.726 0.726
Smad9
M11289_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD8_03 		0.726 0.726
Smad5
M11288_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_01 		0.710 0.710
Smad5
M11292_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD5_03 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22036741m.p SMAD 1 62

Links

Other SMAD family TFs
Other Octopus bimaculoides TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005610 Calypte anna Aan_R005610 I 0.806
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.806
BGIBMGA010481 Bombyx mori BGIBMGA010481 I 0.710
BGLB003972 Biomphalaria glabrata BGLB003972 I 0.790
Brh_R001115 Buceros rhinoceros Brh_R001115 I 0.794
CapteG167863 Capitella teleta CapteG167863 I 0.806
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.887
D918_06928 Trichuris suis D918_06928 I 0.758
SMAD3 Anolis carolinensis ENSACAG00000009914 I 0.806
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.754
ENSAMXG00000016040 Astyanax mexicanus ENSAMXG00000016040 I 0.710
ENSAPLG00000003593 Anas platyrhynchos ENSAPLG00000003593 I 0.710
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.810
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I 0.794
SMAD3 Bos taurus ENSBTAG00000012599 I 0.790
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I 0.806
smad3a Danio rerio ENSDARG00000036096 I 0.823
SMAD3 Equus caballus ENSECAG00000020259 I 0.762
ENSETEG00000017446 Echinops telfairi ENSETEG00000017446 I 0.750
SMAD3 Felis catus ENSFCAG00000027081 I 0.700
SMAD3 Homo sapiens ENSG00000166949 D 0.766
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.806
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I 0.794
ENSLACG00000011178 Latimeria chalumnae ENSLACG00000011178 I 0.726
ENSMEUG00000016668 Macropus eugenii ENSMEUG00000016668 I 0.790
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.797
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.718
SMAD3 Myotis lucifugus ENSMLUG00000002185 I 0.790
SMAD9 Myotis lucifugus ENSMLUG00000006399 I 0.726
ENSMPUG00000000304 Mustela putorius furo ENSMPUG00000000304 I 0.790
Smad3 Mus musculus ENSMUSG00000032402 D 0.742
SMAD5 Ornithorhynchus anatinus ENSOANG00000009906 I 0.710
SMAD9 Procavia capensis ENSPCAG00000002604 I 0.726
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.790
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.855
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I 0.762
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I 0.726
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I 0.794
SMAD3 Sus scrofa ENSSSCG00000004952 I 0.790
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.855
ENSTRUG00000002512 Takifugu rubripes ENSTRUG00000002512 I 0.758
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.823
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.855
SMAD1 Vicugna pacos ENSVPAG00000003340 I 0.710
Mad Drosophila melanogaster FBgn0011648 D 0.726
GF20577 Drosophila ananassae FBgn0097583 I 0.726
GG24457 Drosophila erecta FBgn0116589 I 0.726
GH10284 Drosophila grimshawi FBgn0117765 I 0.726
GI17981 Drosophila mojavensis FBgn0140721 I 0.726
GL26531 Drosophila persimilis FBgn0164113 I 0.726
GM18164 Drosophila sechellia FBgn0173071 I 0.726
GD22774 Drosophila simulans FBgn0194168 I 0.726
GJ19553 Drosophila virilis FBgn0206695 I 0.726
GK18268 Drosophila willistoni FBgn0220267 I 0.726
GE14935 Drosophila yakuba FBgn0232525 I 0.726
GA28973 Drosophila pseudoobscura FBgn0250331 I 0.726
HelroG186716 Helobdella robusta HelroG186716 I 0.742
L798_03803 Zootermopsis nevadensis L798_03803 I 0.726
MDOA012257 Musca domestica MDOA012257 I 0.726
MDOA015236 Musca domestica MDOA015236 I 0.726
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I 0.726
RPRC008357 Rhodnius prolixus RPRC008357 I 0.710
Sakowv30032201m.g Saccoglossus kowalevskii Sakowv30032201m.g I 0.797
SMAR008230 Strigamia maritima SMAR008230 I 0.855
Tal_R001210 Tyto alba Tal_R001210 I 0.794
TriadG49742 Trichoplax adhaerens TriadG49742 I 0.774
TsM_000781600 Taenia solium TsM_000781600 I 0.710
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I 0.758