nOo.2.0.1.g00181 (Onchocerca ochengi)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 nOo.2.0.1.g00181 T325847_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.775 0.775
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.775 0.775
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.765 0.765
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.765 0.765
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.765 0.765
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.765 0.765
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.765 0.765
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.765 0.765
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.765 0.765
sma-4
M02484_2.00 		Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN		 PBM
Weirauch et al.(2014)
pTH8996 		0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t00181-RA SMAD 461 562

Links

Other SMAD family TFs
Other Onchocerca ochengi TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_13134 Cladophialophora psammophila A1O5_13134 N 0.000
ACRE_078350 Acremonium chrysogenum ACRE_078350 N 0.000
ACLA_007900 Aspergillus clavatus CADACLAG00000690 N 0.000
AFUA_5G01550 Aspergillus fumigatus CADAFUAG00002870 N 0.000
CADANGAG00005441 Aspergillus niger CADANGAG00005441 N 0.000
CFIO01_02089 Colletotrichum fioriniae CFIO01_02089 N 0.000
CMQ_1388 Grosmannia clavigera CMQ_1388 N 0.000
estExt_Genewise1.C_12883 Cryphonectria parasitica estExt_Genewise1.C_12883 N 0.000
e_gw1.00771.84.1 Aspergillus carbonarius e_gw1.00771.84.1 N 0.000
e_gw1.20.1612.1 Nectria haematococca e_gw1.20.1612.1 N 0.000
F503_02152 Ophiostoma piceae uamh F503_02152 N 0.000
FFUJ_00276 Fusarium fujikuroi FFUJ_00276 N 0.000
fgenesh1_pg.sca_5_chr5_3_0000637 Nectria haematococca fgenesh1_pg.sca_5_chr5_3_0000637 N 0.000
FGRRES_00217 Fusarium graminearum FGRRES_00217 N 0.000
FOXG_01257 Fusarium oxysporum FOXG_01257 N 0.000
FPSE_06963 Fusarium pseudograminearum FPSE_06963 N 0.000
GGTG_12271 Gaeumannomyces graminis GGTG_12271 N 0.000
H072_10163 Dactylellina haptotyla H072_10163 N 0.000
HMPREF1120_00645 Exophiala dermatitidis HMPREF1120_00645 N 0.000
HMPREF1624_05416 Sporothrix schenckii HMPREF1624_05416 N 0.000
M438DRAFT_402343 Aureobasidium pullulans M438DRAFT_402343 N 0.000
MAPG_09611 Magnaporthe poae MAPG_09611 N 0.000
NechaG44183 Fusarium solani NechaG44183 N 0.000
OIDMADRAFT_169765 Oidiodendron maius OIDMADRAFT_169765 N 0.000
Pc16g10860 Penicillium chrysogenum Pc16g10860 N 0.000
PCH_Pc16g10860 Penicillium rubens PCH_Pc16g10860 N 0.000
PEX1_030190 Penicillium expansum PEX1_030190 N 0.000
PFICI_01074 Pestalotiopsis fici PFICI_01074 N 0.000
PITC_081790 Penicillium italicum PITC_081790 N 0.000
PMAA_080390 Penicillium marneffei PMAA_080390 N 0.000
PMAA_080390 Talaromyces marneffei PMAA_080390 N 0.000
PV06_10606 Exophiala oligosperma PV06_10606 N 0.000
PV07_02862 Cladophialophora immunda PV07_02862 N 0.000
PV08_02174 Exophiala spinifera PV08_02174 N 0.000
PVAR5_0122 Byssochlamys spectabilis PVAR5_0122 N 0.000
S40285_04047 Stachybotrys chlorohalonata S40285_04047 N 0.000
SNOG_10852 Stagonospora nodorum SNOG_10852 N 0.000
SPBR_04675 Sporothrix brasiliensis SPBR_04675 N 0.000
THITE_2107846 Thielavia terrestris THITE_2107846 N 0.000
TSTA_114940 Talaromyces stipitatus TSTA_114940 N 0.000
U727_00431181161 Penicillium solitum U727_00431181161 N 0.000
UCRPA7_5783 Togninia minima UCRPA7_5783 N 0.000
Z517_00469 Fonsecaea pedrosoi Z517_00469 N 0.000
Z518_11281 Rhinocladiella mackenziei Z518_11281 N 0.000
Z519_11260 Cladophialophora bantiana Z519_11260 N 0.000