CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BN946_scf184994.g60
(
Trametes cinnabarina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
BN946_scf184994.g60
T326644_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CDO72807
Sox
12
83
PPRPPNAWMLYRADKSKELTQGRPAGMVLLQAEISRILGQRWALETPSVRDFYEQKAKEAKEAHERMYPDYQ
Links
Other
Sox
family TFs
Other
Trametes cinnabarina
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_13042
Cladophialophora psammophila
A1O5_13042
I
0.454
A1O7_09629
Cladophialophora yegresii
A1O7_09629
I
0.428
AGABI2DRAFT_192530
Agaricus bisporus
AGABI2DRAFT_192530
N
0.467
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.429
BN946_scf184908.g134
Trametes cinnabarina
BN946_scf184908.g134
I
0.443
BN946_scf184994.g55
Trametes cinnabarina
BN946_scf184994.g55
I
0.489
BOTBODRAFT_190207
Botryobasidium botryosum
BOTBODRAFT_190207
I
0.429
BOTBODRAFT_99971
Botryobasidium botryosum
BOTBODRAFT_99971
N
0.526
CC1G_07392
Coprinopsis cinerea
CC1G_07392
N
0.519
CERSUDRAFT_123639
Ceriporiopsis subvermispora
CERSUDRAFT_123639
N
0.459
CFIO01_09392
Colletotrichum fioriniae
CFIO01_09392
I
0.415
CH063_09403
Colletotrichum higginsianum
CH063_09403
I
0.426
CY34DRAFT_56447
Suillus luteus
CY34DRAFT_56447
N
0.484
CY34DRAFT_797588
Suillus luteus
CY34DRAFT_797588
I
0.427
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.467
E5Q_02264
Mixia osmundae
E5Q_02264
N
0.436
EPUS_08057
Endocarpon pusillum
EPUS_08057
I
0.435
EURHEDRAFT_401871
Aspergillus ruber
EURHEDRAFT_401871
I
0.420
FFUJ_05685
Fusarium fujikuroi
FFUJ_05685
I
0.467
fgenesh1_pg.C_scaffold_8000024
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_8000024
N
0.415
FGRRES_08893
Fusarium graminearum
FGRRES_08893
I
0.461
FIBRA_02642
Fibroporia radiculosa
FIBRA_02642
I
0.497
FOMPIDRAFT_1081834
Fomitopsis pinicola
FOMPIDRAFT_1081834
I
0.488
FOMPIDRAFT_140591
Fomitopsis pinicola
FOMPIDRAFT_140591
I
0.478
G647_10298
Cladophialophora carrionii
G647_10298
I
0.428
GALMADRAFT_227034
Galerina marginata
GALMADRAFT_227034
N
0.459
Genemark.3077_g
Heterobasidion annosum
Genemark.3077_g
N
0.487
GLOTRDRAFT_38143
Gloeophyllum trabeum
GLOTRDRAFT_38143
I
0.513
gw1.16.772.1
Mycosphaerella fijiensis
gw1.16.772.1
N
0.422
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.415
GYMLUDRAFT_71519
Gymnopus luxurians
GYMLUDRAFT_71519
I
0.502
HETIRDRAFT_476671
Heterobasidion irregulare
HETIRDRAFT_476671
N
0.487
J056_002105
Wallemia ichthyophaga
J056_002105
N
0.513
JAAARDRAFT_93592
Jaapia argillacea
JAAARDRAFT_93592
I
0.524
K443DRAFT_1017
Laccaria amethystina
K443DRAFT_1017
N
0.464
LACBIDRAFT_386478
Laccaria bicolor
LACBIDRAFT_386478
N
0.459
M378DRAFT_176509
Amanita muscaria
M378DRAFT_176509
I
0.479
M404DRAFT_551810
Pisolithus tinctorius
M404DRAFT_551810
N
0.525
M404DRAFT_69579
Pisolithus tinctorius
M404DRAFT_69579
I
0.450
M408DRAFT_20648
Serendipita vermifera
M408DRAFT_20648
N
0.521
M422DRAFT_111122
Sphaerobolus stellatus
M422DRAFT_111122
I
0.521
M422DRAFT_114792
Sphaerobolus stellatus
M422DRAFT_114792
N
0.481
M422DRAFT_121750
Sphaerobolus stellatus
M422DRAFT_121750
N
0.433
M422DRAFT_126587
Sphaerobolus stellatus
M422DRAFT_126587
N
0.433
M422DRAFT_146751
Sphaerobolus stellatus
M422DRAFT_146751
N
0.481
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.475
M422DRAFT_91926
Sphaerobolus stellatus
M422DRAFT_91926
I
0.521
MANI_028883
Metarhizium anisopliae
MANI_028883
I
0.417
MELLADRAFT_94219
Melampsora laricipopulina
MELLADRAFT_94219
N
0.417
Moror_13342
Moniliophthora roreri
Moror_13342
I
0.421
Moror_17490
Moniliophthora roreri
Moror_17490
I
0.421
Moror_9029
Moniliophthora roreri
Moror_9029
N
0.505
MVLG_00343
Microbotryum violaceum
MVLG_00343
N
0.496
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
0.481
MVLG_04557
Microbotryum violaceum
MVLG_04557
N
0.452
MYCFIDRAFT_25002
Pseudocercospora fijiensis
MYCFIDRAFT_25002
N
0.422
PaG_05617
Pseudozyma aphidis
PaG_05617
N
0.536
PAN0_018c5621
Pseudozyma antarctica
PAN0_018c5621
N
0.536
PAXRUDRAFT_55546
Paxillus rubicundulus
PAXRUDRAFT_55546
N
0.484
PAXRUDRAFT_95391
Paxillus rubicundulus
PAXRUDRAFT_95391
I
0.450
PGTG_16202
Puccinia graminis
PGTG_16202
I
0.455
PHSY_001785
Pseudozyma hubeiensis
PHSY_001785
N
0.517
PIIN_01319
Piriformospora indica
PIIN_01319
N
0.534
PISMIDRAFT_39129
Pisolithus microcarpus
PISMIDRAFT_39129
I
0.450
PISMIDRAFT_80640
Pisolithus microcarpus
PISMIDRAFT_80640
N
0.478
PLICRDRAFT_82773
Plicaturopsis crispa
PLICRDRAFT_82773
N
0.444
POSPLDRAFT_104707
Postia placenta
POSPLDRAFT_104707
I
0.493
POSPLDRAFT_43059
Postia placenta
POSPLDRAFT_43059
I
0.492
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
0.486
PV06_08316
Exophiala oligosperma
PV06_08316
I
0.421
RHTO_05563
Rhodosporidium toruloides
RHTO_05563
N
0.456
RTG_00382
Rhodotorula glutinis
RTG_00382
N
0.456
S40288_01998
Stachybotrys chartarum
S40288_01998
I
0.439
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.484
SCLCIDRAFT_11527
Scleroderma citrinum
SCLCIDRAFT_11527
N
0.430
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.488
SERLA73DRAFT_18452
Serpula lacrymans
SERLA73DRAFT_18452
I
0.499
SERLA73DRAFT_71121
Serpula lacrymans
SERLA73DRAFT_71121
I
0.456
sr16650
Sporisorium reilianum
sr16650
N
0.525
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.484
TRIATDRAFT_33998
Trichoderma atroviride
TRIATDRAFT_33998
I
0.429
TRIREDRAFT_124341
Trichoderma reesei
TRIREDRAFT_124341
I
0.429
UHOR_08562
Ustilago hordei
UHOR_08562
N
0.525
UM06025
Ustilago maydis
UM06025
N
0.510