CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SERLA73DRAFT_18452
(
Serpula lacrymans
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
SERLA73DRAFT_18452
T332522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.461
0.529
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.461
0.529
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGN99801
Sox
1
70
PRPPNAWILYRSDKLRSLPPAKKGESRIQGHVSKIVSYMWNNESEQVRSEYERRADARKAQHQLMYPNYK
Links
Other
Sox
family TFs
Other
Serpula lacrymans
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
JAAARDRAFT_93592
Jaapia argillacea
JAAARDRAFT_93592
I
0.569
FIBRA_02642
Fibroporia radiculosa
FIBRA_02642
I
0.557
CC1G_07392
Coprinopsis cinerea
CC1G_07392
N
0.554
POSPLDRAFT_104707
Postia placenta
POSPLDRAFT_104707
I
0.552
POSPLDRAFT_43059
Postia placenta
POSPLDRAFT_43059
I
0.552
GLOTRDRAFT_38143
Gloeophyllum trabeum
GLOTRDRAFT_38143
I
0.549
FOMPIDRAFT_1081834
Fomitopsis pinicola
FOMPIDRAFT_1081834
I
0.544
FOMPIDRAFT_140591
Fomitopsis pinicola
FOMPIDRAFT_140591
I
0.544
M404DRAFT_551810
Pisolithus tinctorius
M404DRAFT_551810
N
0.535
PIIN_01319
Piriformospora indica
PIIN_01319
N
0.532
BOTBODRAFT_99971
Botryobasidium botryosum
BOTBODRAFT_99971
N
0.525
M408DRAFT_20648
Serendipita vermifera
M408DRAFT_20648
N
0.519
CERSUDRAFT_123639
Ceriporiopsis subvermispora
CERSUDRAFT_123639
N
0.516
DICSQDRAFT_67430
Dichomitus squalens
DICSQDRAFT_67430
I
0.507
CY34DRAFT_56447
Suillus luteus
CY34DRAFT_56447
N
0.505
BN946_scf184994.g60
Trametes cinnabarina
BN946_scf184994.g60
N
0.499
M378DRAFT_176509
Amanita muscaria
M378DRAFT_176509
I
0.499
GALMADRAFT_227034
Galerina marginata
GALMADRAFT_227034
N
0.498
PAXRUDRAFT_55546
Paxillus rubicundulus
PAXRUDRAFT_55546
N
0.498
M422DRAFT_111122
Sphaerobolus stellatus
M422DRAFT_111122
I
0.496
M422DRAFT_91926
Sphaerobolus stellatus
M422DRAFT_91926
I
0.496
MVLG_00343
Microbotryum violaceum
MVLG_00343
N
0.496
BN946_scf184994.g55
Trametes cinnabarina
BN946_scf184994.g55
I
0.491
AGABI2DRAFT_192530
Agaricus bisporus
AGABI2DRAFT_192530
N
0.486
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
0.485
HETIRDRAFT_476671
Heterobasidion irregulare
HETIRDRAFT_476671
N
0.484
PISMIDRAFT_80640
Pisolithus microcarpus
PISMIDRAFT_80640
N
0.484
Genemark.3077_g
Heterobasidion annosum
Genemark.3077_g
N
0.484
K443DRAFT_1017
Laccaria amethystina
K443DRAFT_1017
N
0.483
LACBIDRAFT_386478
Laccaria bicolor
LACBIDRAFT_386478
N
0.483
PGTG_16202
Puccinia graminis
PGTG_16202
I
0.483
SBOR_9074
Sclerotinia borealis
SBOR_9074
I
0.482
SS1G_04006
Sclerotinia sclerotiorum
SS1G_04006
I
0.482
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
0.480
Moror_9029
Moniliophthora roreri
Moror_9029
N
0.476
J056_002105
Wallemia ichthyophaga
J056_002105
N
0.475
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.475
GALMADRAFT_133211
Galerina marginata
GALMADRAFT_133211
I
0.474
SCLCIDRAFT_11527
Scleroderma citrinum
SCLCIDRAFT_11527
N
0.470
M422DRAFT_146751
Sphaerobolus stellatus
M422DRAFT_146751
N
0.467
M422DRAFT_114792
Sphaerobolus stellatus
M422DRAFT_114792
N
0.466
MANI_028883
Metarhizium anisopliae
MANI_028883
I
0.464
FOMPIDRAFT_1121239
Fomitopsis pinicola
FOMPIDRAFT_1121239
N
0.461
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.461
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.461
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.461
PILCRDRAFT_57544
Piloderma croceum
PILCRDRAFT_57544
N
0.458
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.457
PaG_05617
Pseudozyma aphidis
PaG_05617
N
0.457
PAN0_018c5621
Pseudozyma antarctica
PAN0_018c5621
N
0.457
RHTO_05563
Rhodosporidium toruloides
RHTO_05563
N
0.457
RTG_00382
Rhodotorula glutinis
RTG_00382
N
0.457
E5Q_02264
Mixia osmundae
E5Q_02264
N
0.456
M408DRAFT_22846
Serendipita vermifera
M408DRAFT_22846
N
0.456
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.453
SCHCODRAFT_238903
Schizophyllum commune
SCHCODRAFT_238903
I
0.453
M404DRAFT_69579
Pisolithus tinctorius
M404DRAFT_69579
I
0.452
M422DRAFT_267643
Sphaerobolus stellatus
M422DRAFT_267643
N
0.452
PISMIDRAFT_39129
Pisolithus microcarpus
PISMIDRAFT_39129
I
0.452
Moror_17490
Moniliophthora roreri
Moror_17490
I
0.451
UM06025
Ustilago maydis
UM06025
N
0.448
SERLA73DRAFT_71121
Serpula lacrymans
SERLA73DRAFT_71121
I
0.446
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.443
M407DRAFT_219396
Tulasnella calospora
M407DRAFT_219396
N
0.442
PHSY_001785
Pseudozyma hubeiensis
PHSY_001785
N
0.442
sr16650
Sporisorium reilianum
sr16650
N
0.442
UHOR_08562
Ustilago hordei
UHOR_08562
N
0.442
SCHCODRAFT_107892
Schizophyllum commune
SCHCODRAFT_107892
N
0.441
PAXRUDRAFT_95391
Paxillus rubicundulus
PAXRUDRAFT_95391
I
0.440
PTRG_10423
Pyrenophora triticirepentis
PTRG_10423
I
0.440
BGHDH14_bgh03211
Blumeria graminis
BGHDH14_bgh03211
I
0.438
MELLADRAFT_94219
Melampsora laricipopulina
MELLADRAFT_94219
N
0.437
SEPMUDRAFT_160654
Sphaerulina musiva
SEPMUDRAFT_160654
I
0.437
SJAG_05153
Schizosaccharomyces japonicus
SJAG_05153
I
0.432
POSPLDRAFT_42762
Postia placenta
POSPLDRAFT_42762
I
0.430
GYMLUDRAFT_71519
Gymnopus luxurians
GYMLUDRAFT_71519
I
0.429
fgenesh1_pg.C_scaffold_8000024
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_8000024
N
0.429
M422DRAFT_121750
Sphaerobolus stellatus
M422DRAFT_121750
N
0.428
M422DRAFT_126587
Sphaerobolus stellatus
M422DRAFT_126587
N
0.428
ACRE_020880
Acremonium chrysogenum
ACRE_020880
N
0.427
FIBRA_04764
Fibroporia radiculosa
FIBRA_04764
I
0.426
GLOINDRAFT_45684
Rhizophagus irregularis
GLOINDRAFT_45684
I
0.426
GLOINDRAFT_49399
Rhizophagus irregularis
GLOINDRAFT_49399
I
0.426
MAJ_03732
Metarhizium majus
MAJ_03732
N
0.426
MGU_03716
Metarhizium guizhouense
MGU_03716
N
0.426
X797_003479
Metarhizium robertsii
X797_003479
N
0.426
DOTSEDRAFT_49782
Dothistroma septosporum
DOTSEDRAFT_49782
I
0.424
SERLA73DRAFT_84266
Serpula lacrymans
SERLA73DRAFT_84266
I
0.424
AGABI2DRAFT_56847
Agaricus bisporus
AGABI2DRAFT_56847
N
0.422
Moror_9770
Moniliophthora roreri
Moror_9770
I
0.422
GLOINDRAFT_26890
Rhizophagus irregularis
GLOINDRAFT_26890
N
0.421
PHACADRAFT_54114
Phanerochaete carnosa
PHACADRAFT_54114
N
0.420
CC1G_07617
Coprinopsis cinerea
CC1G_07617
I
0.419
GLOINDRAFT_344442
Rhizophagus irregularis
GLOINDRAFT_344442
N
0.419
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.417
FPSE_08224
Fusarium pseudograminearum
FPSE_08224
N
0.415
HYDPIDRAFT_99715
Hydnomerulius pinastri
HYDPIDRAFT_99715
N
0.415
M413DRAFT_47178
Hebeloma cylindrosporum
M413DRAFT_47178
N
0.415
PAXRUDRAFT_827004
Paxillus rubicundulus
PAXRUDRAFT_827004
N
0.415