CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE28162
(
Caenorhabditis remanei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CRE28162
T327249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE28162
Sox
52
120
IKRPLNVFMVWSKIERKKYCEAHPDVHNATISQTLAARWKLMSAEEKAPFVAEAERLRLLHMEKYPHYK
CRE28162
Sox
138
169
DESKNRKTQKKRPYEQMAMTENKNFQNQQWNN
Links
Other
Sox
family TFs
Other
Caenorhabditis remanei
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10007727
Chelonia mydas
Cmyd_10007727
N
0.519
genemark-nMf.1.1.scaf01854-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf01854-processed-gene-0.4
N
0.535