CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10007727
(
Chelonia mydas
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Cmyd_10007727
T333657_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10007727
Sox
98
166
VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYK
Cmyd_10007727
Sox
164
195
DYKLLNESDKRPFIEEAERLRMQHKKDHPDYK
Links
Other
Sox
family TFs
Other
Chelonia mydas
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
genemark-nMf.1.1.scaf01854-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf01854-processed-gene-0.4
N
0.568
CLEC004367
Cimex lectularius
CLEC004367
N
0.539
CRE28162
Caenorhabditis remanei
CRE28162
N
0.519
LCUP017801
Lucilia cuprina
LCUP017801
N
0.489
ASIS002444
Anopheles sinensis
ASIS002444
N
0.489
ASIM_0001132301
Anisakis simplex
ASIM_0001132301
N
0.456
GH16346
Drosophila grimshawi
FBgn0123817
N
0.455