EFV48447 (Trichinella spiralis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 EFV48447 T327416_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Cic
M00195_2.00 		Mus musculus
NNTGCTGABN
NVTCAGCANN		 PBM
Badis et al.(2009)
Cic_3454 		0.546 0.893
gei-3
M00711_2.00 		Caenorhabditis elegans
NWNWMWDN
NHWKWNWN		 PBM
Narasimhan et al.(2015)
pTH10038 		0.514 0.804
cic
M06452_2.00 		Drosophila melanogaster
YYCATTSA
TSAATGRR		 B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386 		0.506 0.804
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV48447 Sox 122 177

Links

Other Sox family TFs
Other Trichinella spiralis TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
11867_YJL089W Saccharomyces mikatae 11867_YJL089W I 0.000
17487_YMR280C Saccharomyces mikatae 17487_YMR280C I 0.000
17891_YMR280C Saccharomyces paradoxus 17891_YMR280C I 0.000
19463_YMR280C Saccharomyces bayanus 19463_YMR280C I 0.000
A1O1_06777 Capronia coronata A1O1_06777 I 0.000
A1O3_10373 Capronia epimyces A1O3_10373 I 0.000
A1O5_07453 Cladophialophora psammophila A1O5_07453 I 0.000
A1O7_09708 Cladophialophora yegresii A1O7_09708 I 0.000
A1O9_05407 Exophiala aquamarina A1O9_05407 I 0.000
AACERI_AaceriABL121C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL121C I 0.000
AACERI_AaceriAFR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR096W I 0.000
AB00291.1 Alternaria brassicicola AB00291.1 I 0.000
ACRE_084730 Acremonium chrysogenum ACRE_084730 I 0.000
AGOS_ABL121C Ashbya gossypii AGOS_ABL121C I 0.000
AGOS_AFR096W Ashbya gossypii AGOS_AFR096W I 0.000
AOL_s00080g113 Arthrobotrys oligospora AOL_s00080g113 I 0.000
AOL_s00173g90 Arthrobotrys oligospora AOL_s00173g90 I 0.000
ARB_01763 Arthroderma benhamiae ARB_01763 I 0.000
AUEXF2481DRAFT_25000 Aureobasidium subglaciale AUEXF2481DRAFT_25000 I 0.000
BAUCODRAFT_120474 Baudoinia compniacensis BAUCODRAFT_120474 I 0.000
Bcin05g07910 Botrytis cinerea Bcin05g07910 I 0.000
Bcin14g04080 Botrytis cinerea Bcin14g04080 I 0.000
BDDG_03989 Blastomyces dermatitidis BDDG_03989 I 0.000
BGHDH14_bgh03482 Blumeria graminis BGHDH14_bgh03482 I 0.000
BN7_1590 Wickerhamomyces ciferrii BN7_1590 I 0.000
BN7_5956 Wickerhamomyces ciferrii BN7_5956 I 0.000
ACLA_021920 Aspergillus clavatus CADACLAG00001871 I 0.000
CADAFLAG00003675 Aspergillus flavus CADAFLAG00003675 I 0.000
AFUA_1G13510 Aspergillus fumigatus CADAFUAG00007202 I 0.000
CADANGAG00006980 Aspergillus niger CADANGAG00006980 I 0.000
ANIA_00689 Aspergillus nidulans CADANIAG00001981 D 0.000
CADAORAG00006095 Aspergillus oryzae CADAORAG00006095 I 0.000
ATEG_00558 Aspergillus terreus CADATEAG00006881 I 0.000
NFIA_011990 Neosartorya fischeri CADNFIAG00001575 I 0.000
CAGL0L03377g Candida glabrata CAGL0L03377g I 0.000
CAGL0M03025g Candida glabrata CAGL0M03025g I 0.000
CANTEDRAFT_117377 Candida tenuis CANTEDRAFT_117377 I 0.000
CaO19.10326 Candida albicans CaO19.10326 I 0.000
CaO19.2808 Candida albicans CaO19.2808 I 0.000
CCM_00520 Cordyceps militaris CCM_00520 I 0.000
CD36_83960 Candida dubliniensis CD36_83960 I 0.000
CFIO01_04476 Colletotrichum fioriniae CFIO01_04476 I 0.000
CGGC5_6484 Colletotrichum gloeosporioides CGGC5_6484 I 0.000
CHGG_00728 Chaetomium globosum CHGG_00728 I 0.000
CHGG_02115 Chaetomium globosum CHGG_02115 N 0.000
CIMG_09602 Coccidioides immitis CIMG_09602 I 0.000
CLUG_01305 Candida lusitaniae CLUG_01305 I 0.000
CLUG_01305 Clavispora lusitaniae CLUG_01305 I 0.000
CMQ_3248 Grosmannia clavigera CMQ_3248 I 0.000
CMQ_423 Grosmannia clavigera CMQ_423 I 0.000
Cob_09661 Colletotrichum orbiculare Cob_09661 I 0.000
COCC4DRAFT_160202 Bipolaris maydis COCC4DRAFT_160202 I 0.000
COCCADRAFT_3273 Bipolaris zeicola COCCADRAFT_3273 I 0.000
COCMIDRAFT_23407 Bipolaris oryzae COCMIDRAFT_23407 I 0.000
COCSADRAFT_243527 Bipolaris sorokiniana COCSADRAFT_243527 I 0.000
COCVIDRAFT_103972 Bipolaris victoriae COCVIDRAFT_103972 I 0.000
CORT_0A06750 Candida orthopsilosis CORT_0A06750 I 0.000
CORT_0B04760 Candida orthopsilosis CORT_0B04760 I 0.000
CORT_0C05870 Candida orthopsilosis CORT_0C05870 N 0.000
CPAG_00982 Candida parapsilosis CPAG_00982 I 0.000
CPAG_01919 Candida parapsilosis CPAG_01919 I 0.000
CPAG_05219 Candida parapsilosis CPAG_05219 N 0.000
CPC735_024080 Coccidioides posadasii CPC735_024080 I 0.000
CPUR_03154 Claviceps purpurea CPUR_03154 I 0.000
CSUB01_03093 Colletotrichum sublineola CSUB01_03093 I 0.000
CTHT_0052680 Chaetomium thermophilum CTHT_0052680 I 0.000
CTHT_0074660 Chaetomium thermophilum CTHT_0074660 N 0.000
CTRG_01734 Candida tropicalis CTRG_01734 I 0.000
CTRG_02593 Candida tropicalis CTRG_02593 I 0.000
DEHA2F04202g Debaryomyces hansenii DEHA2F04202g I 0.000
DEHA2G02090g Debaryomyces hansenii DEHA2G02090g I 0.000
DOTSEDRAFT_67755 Dothistroma septosporum DOTSEDRAFT_67755 I 0.000
DRE_01490 Drechslerella stenobrocha DRE_01490 I 0.000
DRE_06992 Drechslerella stenobrocha DRE_06992 I 0.000
Ecym_4616 Eremothecium cymbalariae Ecym_4616 I 0.000
Ecym_6340 Eremothecium cymbalariae Ecym_6340 I 0.000
estExt_fgenesh1_pm.C_60502 Cryphonectria parasitica estExt_fgenesh1_pm.C_60502 I 0.000
estExt_fgenesh2_pg.C_10678 Neurospora discreta estExt_fgenesh2_pg.C_10678 I 0.000
estExt_Genewise1.C_10162 Mycosphaerella fijiensis estExt_Genewise1.C_10162 I 0.000
estExt_Genewise1Plus.C_11533 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11533 I 0.000
estExt_Genewise1Plus.C_chr_12372 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12372 I 0.000
EURHEDRAFT_525504 Aspergillus ruber EURHEDRAFT_525504 I 0.000
e_gw1.43.151.1 Nectria haematococca e_gw1.43.151.1 N 0.000
e_gw1.5.1078.1 Nectria haematococca e_gw1.5.1078.1 I 0.000
F503_06102 Ophiostoma piceae uamh F503_06102 I 0.000
FFUJ_03889 Fusarium fujikuroi FFUJ_03889 N 0.000
FFUJ_07541 Fusarium fujikuroi FFUJ_07541 I 0.000
fgenesh1_pg.C_chr_4.1000626 Pichia stipitis fgenesh1_pg.C_chr_4.1000626 I 0.000
fgenesh1_pm.00083_#_404 Aspergillus carbonarius fgenesh1_pm.00083_#_404 I 0.000
FGRRES_04888_M Fusarium graminearum FGRRES_04888_M N 0.000
FGRRES_09921 Fusarium graminearum FGRRES_09921 D 0.000
FOXG_05502 Fusarium oxysporum FOXG_05502 I 0.000
FOXG_05736 Fusarium oxysporum FOXG_05736 N 0.000
FPSE_03099 Fusarium pseudograminearum FPSE_03099 I 0.000
FPSE_03993 Fusarium pseudograminearum FPSE_03993 N 0.000
FVEG_02639 Fusarium verticillioides FVEG_02639 I 0.000
FVEG_03609 Fusarium verticillioides FVEG_03609 N 0.000
G210_4558 Candida maltosa G210_4558 I 0.000
G210_5363 Candida maltosa G210_5363 I 0.000
G647_08575 Cladophialophora carrionii G647_08575 I 0.000
GGTG_09932 Gaeumannomyces graminis GGTG_09932 I 0.000
GLRG_10212 Colletotrichum graminicola GLRG_10212 I 0.000
GMDG_00261 Pseudogymnoascus destructans GMDG_00261 I 0.000
GMDG_03942 Pseudogymnoascus destructans GMDG_03942 I 0.000
GMDG_06993 Pseudogymnoascus destructans GMDG_06993 I 0.000
GMDG_07325 Pseudogymnoascus destructans GMDG_07325 I 0.000
GNLVRS01_PISO0I17586g Millerozyma farinosa GNLVRS01_PISO0I17586g I 0.000
GNLVRS01_PISO0J19347g Millerozyma farinosa GNLVRS01_PISO0J19347g I 0.000
GNLVRS01_PISO0K20118g Millerozyma farinosa GNLVRS01_PISO0K20118g I 0.000
GNLVRS01_PISO0L20119g Millerozyma farinosa GNLVRS01_PISO0L20119g I 0.000
GSTUM_00004762001 Tuber melanosporum GSTUM_00004762001 I 0.000
GSTUM_00005465001 Tuber melanosporum GSTUM_00005465001 I 0.000
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I 0.000
H072_11612 Dactylellina haptotyla H072_11612 I 0.000
H101_04897 Trichophyton interdigitale H101_04897 I 0.000
H101_06009 Trichophyton interdigitale H101_06009 I 0.000
H102_08256 Trichophyton rubrum H102_08256 I 0.000
H102_08795 Trichophyton rubrum H102_08795 I 0.000
H105_08284 Trichophyton soudanense H105_08284 I 0.000
H105_08820 Trichophyton soudanense H105_08820 I 0.000
HCBG_02970 Histoplasma capsulatum HCBG_02970 I 0.000
HCBG_04348 Histoplasma capsulatum HCBG_04348 I 0.000
HETIRDRAFT_477710 Heterobasidion irregulare HETIRDRAFT_477710 I 0.000
HMPREF1120_01646 Exophiala dermatitidis HMPREF1120_01646 I 0.000
HMPREF1541_02579 Cyphellophora europaea HMPREF1541_02579 I 0.000
HMPREF1624_05843 Sporothrix schenckii HMPREF1624_05843 I 0.000
HMPREF1624_08770 Sporothrix schenckii HMPREF1624_08770 I 0.000
KAFR_0A01480 Kazachstania africana KAFR_0A01480 I 0.000
KAFR_0B03950 Kazachstania africana KAFR_0B03950 I 0.000
KLLA0_D01452g Kluyveromyces lactis KLLA0_D01452g I 0.000
KLLA0_F14322g Kluyveromyces lactis KLLA0_F14322g I 0.000
KLTH0C03762g Lachancea thermotolerans KLTH0C03762g I 0.000
KLTH0C03762g Kluyveromyces thermotolerans KLTH0C03762g I 0.000
KLTH0D03564g Lachancea thermotolerans KLTH0D03564g I 0.000
KLTH0D03564g Kluyveromyces thermotolerans KLTH0D03564g I 0.000
KNAG_0B01840 Kazachstania naganishii KNAG_0B01840 I 0.000
Kpol_1016p20 Vanderwaltozyma polyspora Kpol_1016p20 I 0.000
KUCA_T00004275001 Kuraishia capsulata KUCA_T00004275001 I 0.000
KUCA_T00004675001 Kuraishia capsulata KUCA_T00004675001 I 0.000
Kwal_10232 Kluyveromyces waltii Kwal_10232 I 0.000
LALA0_S03e00276g Lachancea lanzarotensis LALA0_S03e00276g I 0.000
LALA0_S08e06744g Lachancea lanzarotensis LALA0_S08e06744g I 0.000
LELG_00667 Lodderomyces elongisporus LELG_00667 I 0.000
LELG_01997 Lodderomyces elongisporus LELG_01997 I 0.000
LELG_02459 Lodderomyces elongisporus LELG_02459 I 0.000
LEMA_P079800.1 Leptosphaeria maculans LEMA_P079800.1 I 0.000
M437DRAFT_48354 Aureobasidium melanogenum M437DRAFT_48354 I 0.000
M438DRAFT_266991 Aureobasidium pullulans M438DRAFT_266991 I 0.000
MAC_01154 Metarhizium acridum MAC_01154 I 0.000
MAJ_04331 Metarhizium majus MAJ_04331 I 0.000
MAM_07132 Metarhizium album MAM_07132 I 0.000
MANI_010830 Metarhizium anisopliae MANI_010830 I 0.000
MAPG_02877 Magnaporthe poae MAPG_02877 I 0.000
MBM_00482 Marssonina brunnea MBM_00482 I 0.000
MBM_00579 Marssonina brunnea MBM_00579 I 0.000
MBR_01591 Metarhizium brunneum MBR_01591 I 0.000
MCYG_01011 Microsporum canis MCYG_01011 I 0.000
MCYG_01011 Arthroderma otae MCYG_01011 I 0.000
MCYG_02995 Microsporum canis MCYG_02995 I 0.000
MCYG_02995 Arthroderma otae MCYG_02995 I 0.000
MGG_04108 Magnaporthe oryzae MGG_04108 I 0.000
MGU_02269 Metarhizium guizhouense MGU_02269 I 0.000
MGYG_00169 Microsporum gypseum MGYG_00169 I 0.000
MGYG_00975 Microsporum gypseum MGYG_00975 I 0.000
MPH_02048 Macrophomina phaseolina MPH_02048 I 0.000
MPH_09774 Macrophomina phaseolina MPH_09774 I 0.000
MYCFIDRAFT_47796 Pseudocercospora fijiensis MYCFIDRAFT_47796 I 0.000
Mycgr3G66501 Zymoseptoria tritici Mycgr3G66501 I 0.000
MYCTH_2300537 Myceliophthora thermophila MYCTH_2300537 I 0.000
NCAS_0C00390 Naumovozyma castellii NCAS_0C00390 I 0.000
acu-15 Neurospora crassa NCU06656 D 0.000
NDAI_0K00390 Naumovozyma dairenensis NDAI_0K00390 I 0.000
NechaG41465 Fusarium solani NechaG41465 I 0.000
NechaG49659 Fusarium solani NechaG49659 N 0.000
NEUTE1DRAFT_127465 Neurospora tetrasperma NEUTE1DRAFT_127465 I 0.000
OCS_05092 Ophiocordyceps sinensis OCS_05092 I 0.000
OIDMADRAFT_203117 Oidiodendron maius OIDMADRAFT_203117 I 0.000
OIDMADRAFT_40403 Oidiodendron maius OIDMADRAFT_40403 I 0.000
PAAG_03745 Paracoccidioides sp lutzii PAAG_03745 I 0.000
PAAG_11872 Paracoccidioides sp lutzii PAAG_11872 I 0.000
PABG_00794 Paracoccidioides brasiliensis PABG_00794 I 0.000
PABG_04235 Paracoccidioides brasiliensis PABG_04235 I 0.000
PAS_chr2-1_0757 Komagataella pastoris PAS_chr2-1_0757 I 0.000
PAS_chr4_0540 Komagataella pastoris PAS_chr4_0540 I 0.000
Pc13g12510 Penicillium chrysogenum Pc13g12510 I 0.000
PCH_Pc13g12510 Penicillium rubens PCH_Pc13g12510 I 0.000
PDE_00198 Penicillium oxalicum PDE_00198 I 0.000
PDIP_26660 Penicillium digitatum PDIP_26660 I 0.000
PEX1_082400 Penicillium expansum PEX1_082400 I 0.000
PFICI_07248 Pestalotiopsis fici PFICI_07248 I 0.000
PGUG_01292 Candida guilliermondii PGUG_01292 I 0.000
PGUG_01292 Meyerozyma guilliermondii PGUG_01292 I 0.000
PICST_31755 Scheffersomyces stipitis PICST_31755 I 0.000
PICST_622 Scheffersomyces stipitis PICST_622 I 0.000
PITC_056580 Penicillium italicum PITC_056580 I 0.000
PMAA_067280 Talaromyces marneffei PMAA_067280 I 0.000
PMAA_067280 Penicillium marneffei PMAA_067280 I 0.000
PODANS_1_900 Podospora anserina PODANS_1_900 N 0.000
PODANS_2_2140 Podospora anserina PODANS_2_2140 I 0.000
PTRG_09927 Pyrenophora triticirepentis PTRG_09927 I 0.000
PTT_11750 Pyrenophora teres PTT_11750 I 0.000
PV04_10755 Capronia semiimmersa PV04_10755 I 0.000
PV05_02803 Exophiala xenobiotica PV05_02803 I 0.000
PV06_08403 Exophiala oligosperma PV06_08403 I 0.000
PV07_12426 Cladophialophora immunda PV07_12426 I 0.000
PV08_06719 Exophiala spinifera PV08_06719 I 0.000
PV09_05217 Verruconis gallopava PV09_05217 I 0.000
PV10_00718 Exophiala mesophila PV10_00718 I 0.000
PV10_01410 Exophiala mesophila PV10_01410 I 0.000
PV11_05983 Exophiala sideris PV11_05983 I 0.000
PVAR5_8553 Byssochlamys spectabilis PVAR5_8553 I 0.000
S40285_06249 Stachybotrys chlorohalonata S40285_06249 I 0.000
S40288_04897 Stachybotrys chartarum S40288_04897 I 0.000
SAKL0D01342g Lachancea kluyveri SAKL0D01342g I 0.000
SAKL0D05654g Lachancea kluyveri SAKL0D05654g I 0.000
SAPIO_CDS1259 Scedosporium apiospermum SAPIO_CDS1259 I 0.000
SBOR_9682 Sclerotinia borealis SBOR_9682 I 0.000
Scas_Contig696.44 Saccharomyces castellii Scas_Contig696.44 I 0.000
SEPMUDRAFT_146690 Sphaerulina musiva SEPMUDRAFT_146690 I 0.000
SETTUDRAFT_182790 Setosphaeria turcica SETTUDRAFT_182790 I 0.000
SKUD_207003 Saccharomyces kudriavzevii SKUD_207003 I 0.000
SMAC_06552 Sordaria macrospora SMAC_06552 I 0.000
SNOG_10771 Stagonospora nodorum SNOG_10771 I 0.000
SNOG_10771 Phaeosphaeria nodorum SNOG_10771 I 0.000
SPAPADRAFT_154694 Spathaspora passalidarum SPAPADRAFT_154694 I 0.000
SPBR_00143 Sporothrix brasiliensis SPBR_00143 I 0.000
SPBR_02251 Sporothrix brasiliensis SPBR_02251 I 0.000
SS1G_10339 Sclerotinia sclerotiorum SS1G_10339 I 0.000
TBLA_0D05420 Tetrapisispora blattae TBLA_0D05420 I 0.000
TDEL_0B00530 Torulaspora delbrueckii TDEL_0B00530 I 0.000
TEQG_01038 Trichophyton equinum TEQG_01038 I 0.000
TESG_04568 Trichophyton tonsurans TESG_04568 I 0.000
TESG_07986 Trichophyton tonsurans TESG_07986 I 0.000
THITE_2106669 Thielavia terrestris THITE_2106669 I 0.000
TPHA_0I02820 Tetrapisispora phaffii TPHA_0I02820 I 0.000
TRIATDRAFT_221379 Trichoderma atroviride TRIATDRAFT_221379 I 0.000
TRIATDRAFT_295508 Trichoderma atroviride TRIATDRAFT_295508 I 0.000
TRIREDRAFT_49232 Trichoderma reesei TRIREDRAFT_49232 I 0.000
TRIVIDRAFT_166933 Trichoderma virens TRIVIDRAFT_166933 I 0.000
TRIVIDRAFT_33603 Trichoderma virens TRIVIDRAFT_33603 I 0.000
TRV_01331 Trichophyton verrucosum TRV_01331 I 0.000
TSTA_087380 Talaromyces stipitatus TSTA_087380 I 0.000
U727_0043367091 Penicillium solitum U727_0043367091 I 0.000
UCREL1_9979 Eutypa lata UCREL1_9979 I 0.000
UCRNP2_6692 Neofusicoccum parvum UCRNP2_6692 I 0.000
UCRNP2_919 Neofusicoccum parvum UCRNP2_919 I 0.000
UCRPA7_1587 Togninia minima UCRPA7_1587 I 0.000
UREG_04565 Uncinocarpus reesii UREG_04565 I 0.000
UV8b_3025 Ustilaginoidea virens UV8b_3025 I 0.000
V499_01314 Pseudogymnoascus pannorum V499_01314 I 0.000
V499_01421 Pseudogymnoascus pannorum V499_01421 I 0.000
V499_08426 Pseudogymnoascus pannorum V499_08426 I 0.000
VDAG_00301 Verticillium dahliae VDAG_00301 I 0.000
VDBG_00686 Verticillium albo atrum VDBG_00686 I 0.000
VDBG_00686 Verticillium alfalfae VDBG_00686 I 0.000
VHEMI01993 Torrubiella hemipterigena VHEMI01993 I 0.000
W97_03320 Coniosporium apollinis W97_03320 I 0.000
W97_07671 Coniosporium apollinis W97_07671 I 0.000
X797_002104 Metarhizium robertsii X797_002104 I 0.000
XP_002491690.1 Pichia pastoris XP_002491690.1 I 0.000
XP_002493979.1 Pichia pastoris XP_002493979.1 I 0.000
YALI0_C19151g Yarrowia lipolytica YALI0_C19151g I 0.000
CAT8 Saccharomyces cerevisiae YMR280C D 0.000
Z517_12110 Fonsecaea pedrosoi Z517_12110 I 0.000
Z518_06304 Rhinocladiella mackenziei Z518_06304 I 0.000
Z519_06020 Cladophialophora bantiana Z519_06020 I 0.000
ZBAI_00324 Zygosaccharomyces bailii ZBAI_00324 I 0.000
ZBAI_02613 Zygosaccharomyces bailii ZBAI_02613 I 0.000
ZBAI_07009 Zygosaccharomyces bailii ZBAI_07009 I 0.000
ZYRO0G14278g Zygosaccharomyces rouxii ZYRO0G14278g I 0.000
ZYRO0G15136g Zygosaccharomyces rouxii ZYRO0G15136g I 0.000