ENSSTOG00000006847 (Ictidomys tridecemlineatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSSTOG00000006847 T329162_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf7l2
M00198_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Tcf7l2_3461 		0.741 1.000
Tcf7l2
M02646_2.00 		Mus musculus
SATCAAAGN
NCTTTGATS		 SELEX
Hallikas et al.(2006)
Tcf4 		0.741 1.000
TCF7L2
M08167_2.00 		Homo sapiens
NVASWTCAAAGVVN
NBBCTTTGAWSTBN		 ChIP-seq
Mathelier et al.(2014)
MA0523.1 		0.741 1.000
TCF7L2
M09393_2.00 		Homo sapiens
DGCAGSTGKS
SMCASCTGCH		 Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C 		0.741 1.000
TCF7L2
M09394_2.00 		Homo sapiens
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A 		0.741 1.000
Tcf7l2
M09401_2.00 		Mus musculus
VVASWTCAAAGVV
BBCTTTGAWSTBB		 Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A 		0.741 1.000
TCF7L2
M09638_2.00 		Homo sapiens
CCTTTGAWST
ASWTCAAAGG		 Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196 		0.741 1.000
TCF7L2
M11316_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_01 		0.741 1.000
TCF7L2
M11317_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5_02 		0.741 1.000
TCF7L2
M11318_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF4_Q5 		0.741 1.000
TCF7L2
M11319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF7L2_06 		0.741 1.000
Lef1
M00200_2.00 		Mus musculus
NSWTCAAAVN
NBTTTGAWSN		 PBM
Badis et al.(2009)
Lef1_3504 		0.741 0.986
LEF1
M03511_2.00 		Homo sapiens
NRAGATCAAAGRVWW
WWBYCTTTGATCTYN		 SELEX
Jolma et al.(2013)
LEF1_1 		0.741 0.986
LEF1
M05771_2.00 		Homo sapiens
NSATCAAAS
STTTGATSN		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1 		0.741 0.986
LEF1
M05772_2.00 		Homo sapiens
WCATCGRGRCGCTGW
WCAGCGYCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2 		0.741 0.986
LEF1
M05775_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1 		0.741 0.986
LEF1
M05776_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2 		0.741 0.986
LEF1
M05895_2.00 		Homo sapiens
WTCAAAGNNN
NNNCTTTGAW		 SMiLE-seq
Isakova et al.(2017)
LEF1 		0.741 0.986
LEF1
M09392_2.00 		Homo sapiens
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A 		0.741 0.986
Lef1
M09402_2.00 		Mus musculus
BSYTTTSWNNTBYH
DRVANNWSAAARSV		 Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B 		0.741 0.986
LEF1
M11311_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q2_01 		0.741 0.986
LEF1
M11312_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q3 		0.741 0.986
LEF1
M11313_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q4 		0.741 0.986
LEF1
M11314_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5_01 		0.741 0.986
LEF1
M11315_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LEF1_Q5 		0.741 0.986
LEF1
M05773_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1 		0.741 0.986
LEF1
M05774_2.00 		Homo sapiens
WCATCGRGGCGCTGW
WCAGCGCCYCGATGW		 SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2 		0.741 0.986
LEF1
M05777_2.00 		Homo sapiens
ASATCAAAG
CTTTGATST		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1 		0.741 0.986
LEF1
M05778_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2 		0.741 0.986
Tcf7l1
M00207_2.00 		Mus musculus
NNNNWWDN
NHWWNNNN		 PBM
Badis et al.(2009)
Tcf3_3787 		0.741 0.928
TCF7L1
M03512_2.00 		Homo sapiens
AAAGATCAAAGG
CCTTTGATCTTT		 SELEX
Jolma et al.(2013)
TCF7L1_1 		0.741 0.928
TCF7L1
M05779_2.00 		Homo sapiens
RSATCAAAG
CTTTGATSY		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1 		0.741 0.928
TCF7L1
M05780_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2 		0.741 0.928
TCF7L1
M09395_2.00 		Homo sapiens
NBBCTTTGAWSTB
VASWTCAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B 		0.741 0.928
Tcf7l1
M09406_2.00 		Mus musculus
BBCTTTGAWST
ASWTCAAAGVV		 Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A 		0.741 0.928
Tcf7l1
M09407_2.00 		Mus musculus
NDGCAGSTGBB
VVCASCTGCHN		 Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A 		0.741 0.928
TCF7L1
M11320_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_01 		0.741 0.928
TCF7L1
M11321_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6_01 		0.741 0.928
TCF7L1
M11322_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF3_Q6 		0.741 0.928
TCF7L1
M05781_2.00 		Homo sapiens
CTTTGATSY
RSATCAAAG		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1 		0.741 0.928
TCF7L1
M05782_2.00 		Homo sapiens
ACATCGRGRCGCTGW
WCAGCGYCYCGATGT		 SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2 		0.741 0.928
pan
M06451_2.00 		Drosophila melanogaster
DWYCAAAD
HTTTGRWH		 B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432 		0.720 0.928
pan
M08428_2.00 		Drosophila melanogaster
WHNAAAVRNRSCGM
KCGSYNYBTTTNDW		 ChIP-chip
Mathelier et al.(2014)
MA0237.2 		0.720 0.928
pan
M11337_2.00 		Drosophila melanogaster
AAGATCAAAGG
CCTTTGATCTT		 Transfac
Matys et al.(2006)
I$TCF_1 		0.720 0.928
pan
M11338_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TCF_Q6 		0.720 0.928
Tcf7
M00193_2.00 		Mus musculus
HNHNNNNNN
NNNNNNDND		 PBM
Badis et al.(2009)
Tcf7_0950 		0.716 0.986
Tcf7
M03532_2.00 		Mus musculus
AAASATCAAAGV
BCTTTGATSTTT		 SELEX
Jolma et al.(2013)
Tcf7_1 		0.716 0.986
TCF7
M05755_2.00 		Homo sapiens
DSATCAAWS
SWTTGATSH		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1 		0.716 0.986
TCF7
M05756_2.00 		Homo sapiens
WCWKCGYCYCGWTGW
WCAWCGRGRCGMWGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2 		0.716 0.986
TCF7
M05890_2.00 		Homo sapiens
NNASATCAAASNN
NNSTTTGATSTNN		 SMiLE-seq
Isakova et al.(2017)
TCF7 		0.716 0.986
TCF7
M09386_2.00 		Homo sapiens
NBBCTTTSAWSTBNBN
NVNVASWTSAAAGVVN		 Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A 		0.716 0.986
Tcf7
M09400_2.00 		Mus musculus
VVRVADSAAARVVVNV
BNBBBYTTTSHTBYBB		 Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A 		0.716 0.986
TCF7
M11294_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5_01 		0.716 0.986
TCF7
M11295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TCF1_Q5 		0.716 0.986
TCF7
M05757_2.00 		Homo sapiens
RSATCAAAS
STTTGATSY		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1 		0.716 0.986
TCF7
M05758_2.00 		Homo sapiens
WCAWCGRGRCGMWGW
WCWKCGYCYCGWTGW		 SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2 		0.716 0.986
pop-1
M00712_2.00 		Caenorhabditis elegans
NNHDWVNNNN
NNNNBWHDNN		 PBM
Narasimhan et al.(2015)
pTH9135 		0.515 0.551
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000006127 Sox 197 265

Links

Other Sox family TFs
Other Ictidomys tridecemlineatus TFs

512 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_005160 Albugo laibachii ALNC14_005160 N
ALNC14_059320 Albugo laibachii ALNC14_059320 N
ALNC14_105430 Albugo laibachii ALNC14_105430 N
AMTR_s00040p00209530 Amborella trichopoda AMTR_s00040p00209530 I
cassava31881.m1 Manihot esculenta cassava31881.m1 I
cassava41329.m1 Manihot esculenta cassava41329.m1 I
estExt_fgenesh1_kg.C_18600002 Phytophthora capsici estExt_fgenesh1_kg.C_18600002 N
estExt_fgenesh2_pm.C_560011 Fragilariopsis cylindrus estExt_fgenesh2_pm.C_560011 N
estExt_Genewise1.C_61306 Fragilariopsis cylindrus estExt_Genewise1.C_61306 N
evm.TU.supercontig_50.58 Carica papaya evm.TU.supercontig_50.58 I
e_gw1.31.51.1 Fragilariopsis cylindrus e_gw1.31.51.1 N
e_gw1.56.45.1 Fragilariopsis cylindrus e_gw1.56.45.1 N
F443_12676 Phytophthora parasitica F443_12676 N
F443_17091 Phytophthora parasitica F443_17091 N
ATHSFA1D Arabidopsis lyrata fgenesh2_kg.1__3374__AT1G32330.1 I
fgenesh_scip_prom.28083.184 Phytophthora lateralis fgenesh_scip_prom.28083.184 N
fgenesh_scip_prom.28083.6132 Phytophthora lateralis fgenesh_scip_prom.28083.6132 N
fgenesh_scip_prom.46568.615 Phytophthora kernoviae fgenesh_scip_prom.46568.615 N
Gorai.007G033300 Gossypium raimondii Gorai.007G033300 I
gw1.7.507.1 Phytophthora capsici gw1.7.507.1 N
HpaG805361 Hyaloperonospora arabidopsidis HpaG805361 N
HpaG812965 Hyaloperonospora arabidopsidis HpaG812965 N
maker-pag1_scaffold_1-fgenesh-gene-0.16 Pythium aphanidermatum maker-pag1_scaffold_1-fgenesh-gene-0.16 N
maker-pag1_scaffold_219-snap-gene-0.16 Pythium aphanidermatum maker-pag1_scaffold_219-snap-gene-0.16 I
maker-par_contig_3120-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_3120-fgenesh-gene-0.1 I
maker-par_contig_884-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_884-fgenesh-gene-0.0 N
maker-pir_contig_1488-snap-gene-0.4 Pythium irregulare maker-pir_contig_1488-snap-gene-0.4 N
maker-pir_contig_16-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_16-fgenesh-gene-0.1 N
maker-piw_contig_424-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_424-fgenesh-gene-0.5 N
maker-pve_contig_139-fgenesh-gene-0.10 Pythium vexans maker-pve_contig_139-fgenesh-gene-0.10 N
MTR_5g029680 Medicago truncatula MTR_5g029680 I
Phatr3_J33380 Phaeodactylum tricornutum Phatr3_J33380 N
Phatr3_J33622 Phaeodactylum tricornutum Phatr3_J33622 N
Phatr3_J34724 Phaeodactylum tricornutum Phatr3_J34724 N
Phatr3_J42824 Phaeodactylum tricornutum Phatr3_J42824 N
Phatr3_J44029 Phaeodactylum tricornutum Phatr3_J44029 N
HSF3 Phaeodactylum tricornutum Phatr3_J44200 N
Phatr3_J45112 Phaeodactylum tricornutum Phatr3_J45112 N
Phyra78686 Phytophthora ramorum Phyra78686 N
Phyra79919 Phytophthora ramorum Phyra79919 N
Physo157297 Phytophthora sojae Physo157297 N
PITG_06935 Phytophthora infestans PITG_06935 N
PITG_08199 Phytophthora infestans PITG_08199 N
Pm013905 Prunus mume Pm013905 I
Pm023178 Prunus mume Pm023178 I
POPTR_0004s04260 Populus trichocarpa POPTR_0004s04260 I
POPTR_0011s05130 Populus trichocarpa POPTR_0011s05130 I
POPTR_0014s13780 Populus trichocarpa POPTR_0014s13780 I
PRUPE_ppa015468mg Prunus persica PRUPE_ppa015468mg I
PYU1_G011054 Pythium ultimum PYU1_G011054 N
PYU1_G014028 Pythium ultimum PYU1_G014028 N
SapurV1A.0012s0230 Salix purpurea SapurV1A.0012s0230 I
SapurV1A.3168s0020 Salix purpurea SapurV1A.3168s0020 I
SELMODRAFT_39381 Selaginella moellendorffii SELMODRAFT_39381 I
SELMODRAFT_39384 Selaginella moellendorffii SELMODRAFT_39384 I
SPRG_00701 Saprolegnia parasitica SPRG_00701 N
SPRG_00754 Saprolegnia parasitica SPRG_00754 N
SPRG_01593 Saprolegnia parasitica SPRG_01593 I
SPRG_08046 Saprolegnia parasitica SPRG_08046 N
SPRG_16586 Saprolegnia parasitica SPRG_16586 N
Thaps22124 Thalassiosira pseudonana Thaps22124 N
Thaps24112 Thalassiosira pseudonana Thaps24112 N
Thaps269474 Thalassiosira pseudonana Thaps269474 N
Thaps4315 Thalassiosira pseudonana Thaps4315 N