CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps24112
(
Thalassiosira pseudonana
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Thaps24112
T242229_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps24112
HSF
26
129
FLQKTYHMIDTCPPDICTWSHDGLTFIVKDVDTFASSIIPMFFKHNNFSSFVRQLNFYGFRKCKNEGIRLDDVDEETASKYWRFKHDLFLRGRPDMLCQIKKAN
Links
Other
HSF
family TFs
Other
Thalassiosira pseudonana
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thaps269474
Thalassiosira pseudonana
Thaps269474
N
0.491
estExt_fgenesh2_pm.C_560011
Fragilariopsis cylindrus
estExt_fgenesh2_pm.C_560011
N
0.438
e_gw1.56.45.1
Fragilariopsis cylindrus
e_gw1.56.45.1
N
0.426
Thaps22124
Thalassiosira pseudonana
Thaps22124
N
0.423
Phatr3_J34724
Phaeodactylum tricornutum
Phatr3_J34724
N
0.409
e_gw1.8.474.1
Fragilariopsis cylindrus
e_gw1.8.474.1
N
0.401
e_gw1.31.51.1
Fragilariopsis cylindrus
e_gw1.31.51.1
N
0.392
Phatr3_J44029
Phaeodactylum tricornutum
Phatr3_J44029
N
0.386
SPRG_08046
Saprolegnia parasitica
SPRG_08046
N
0.383
SPRG_00754
Saprolegnia parasitica
SPRG_00754
N
0.381
maker-pve_contig_139-fgenesh-gene-0.10
Pythium vexans
maker-pve_contig_139-fgenesh-gene-0.10
N
0.376
gw1.7.507.1
Phytophthora capsici
gw1.7.507.1
N
0.376
estExt_fgenesh1_kg.C_18600002
Phytophthora capsici
estExt_fgenesh1_kg.C_18600002
N
0.376
Phatr3_J42824
Phaeodactylum tricornutum
Phatr3_J42824
N
0.376
ALNC14_059320
Albugo laibachii
ALNC14_059320
N
0.373
Thaps4315
Thalassiosira pseudonana
Thaps4315
N
0.373
ALNC14_105430
Albugo laibachii
ALNC14_105430
N
0.373
HpaG812965
Hyaloperonospora arabidopsidis
HpaG812965
N
0.372
Physo135389
Phytophthora sojae
Physo135389
N
0.372
Phatr3_J45112
Phaeodactylum tricornutum
Phatr3_J45112
N
0.370
Phatr3_J33622
Phaeodactylum tricornutum
Phatr3_J33622
N
0.367
HpaG803356
Hyaloperonospora arabidopsidis
HpaG803356
N
0.362
Phatr3_J33380
Phaeodactylum tricornutum
Phatr3_J33380
N
0.354
Phyra75445
Phytophthora ramorum
Phyra75445
N
0.350
PITG_04701
Phytophthora infestans
PITG_04701
N
0.350
fgenesh_scip_prom.28083.10203
Phytophthora lateralis
fgenesh_scip_prom.28083.10203
N
0.350
estExt_fgenesh1_kg.C_170233
Phytophthora capsici
estExt_fgenesh1_kg.C_170233
N
0.350
F443_15755
Phytophthora parasitica
F443_15755
N
0.350
Physo142181
Phytophthora sojae
Physo142181
N
0.350
snap_masked-pag1_scaffold_539-abinit-gene-0.22
Pythium aphanidermatum
snap_masked-pag1_scaffold_539-abinit-gene-0.22
N
0.345
estExt_Genewise1.C_61306
Fragilariopsis cylindrus
estExt_Genewise1.C_61306
N
0.343
ALNC14_004010
Albugo laibachii
ALNC14_004010
N
0.342
maker-piw_contig_1230-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_1230-fgenesh-gene-0.2
N
0.342
maker-pir_contig_314-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_314-fgenesh-gene-0.8
N
0.342
PYU1_G007494
Pythium ultimum
PYU1_G007494
N
0.342
maker-pve_contig_1180-snap-gene-0.4
Pythium vexans
maker-pve_contig_1180-snap-gene-0.4
N
0.342
PITG_08199
Phytophthora infestans
PITG_08199
N
0.341
F443_12676
Phytophthora parasitica
F443_12676
N
0.341
PYU1_G014028
Pythium ultimum
PYU1_G014028
N
0.340
fgenesh2_pg.8_#_244
Fragilariopsis cylindrus
fgenesh2_pg.8_#_244
N
0.339
ALNC14_005160
Albugo laibachii
ALNC14_005160
N
0.339
maker-pir_contig_1488-snap-gene-0.4
Pythium irregulare
maker-pir_contig_1488-snap-gene-0.4
N
0.337
HSF3
Phaeodactylum tricornutum
Phatr3_J44200
N
0.333
fgenesh_scip_prom.46568.615
Phytophthora kernoviae
fgenesh_scip_prom.46568.615
N
0.332
maker-piw_contig_424-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_424-fgenesh-gene-0.5
N
0.330
fgenesh_scip_prom.28083.6132
Phytophthora lateralis
fgenesh_scip_prom.28083.6132
N
0.329
Phyra78686
Phytophthora ramorum
Phyra78686
N
0.329
PYU1_G011054
Pythium ultimum
PYU1_G011054
N
0.321
maker-pir_contig_16-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_16-fgenesh-gene-0.1
N
0.320
maker-par_contig_3120-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_3120-fgenesh-gene-0.1
I
0.319
SPRG_01593
Saprolegnia parasitica
SPRG_01593
I
0.318