CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CG7045
(
Drosophila melanogaster
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0038978
T329518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG7046
M03980_2.00
Drosophila melanogaster
RWGGATTRCAGCAH
DTGCTGYAATCCWY
SELEX
Nitta et al.(2015)
CG7046_1
0.681
0.899
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0083651
Sox
8
77
PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEKLKQWN
Links
Other
Sox
family TFs
Other
Drosophila melanogaster
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin106338
Clonorchis sinensis
csin106338
N
D915_04878
Fasciola hepatica
D915_04878
N
D915_16004
Fasciola hepatica
D915_16004
N
DILT_0000795401
Diphyllobothrium latum
DILT_0000795401
N
ECANG7_04646
Echinococcus canadensis
ECANG7_04646
N
ECPE_0000730301
Echinostoma caproni
ECPE_0000730301
N
EmuJ_000909600
Echinococcus multilocularis
EmuJ_000909600
N
HDID_0000023001
Hymenolepis diminuta
HDID_0000023001
N
HmN_000710500
Hymenolepis microstoma
HmN_000710500
N
HNAJ_0001165601
Hymenolepis nana
HNAJ_0001165601
N
MCOS_0000221201
Mesocestoides corti
MCOS_0000221201
N
PXEA_0002775801
Protopolystoma xenopodis
PXEA_0002775801
N
SCUD_0000069601
Schistosoma curassoni
SCUD_0000069601
N
Smp_063030
Schistosoma mansoni
Smp_063030
N
SMRZ_0000239101
Schistosoma margrebowiei
SMRZ_0000239101
N
SMU15014459
Schmidtea mediterranea
SMU15014459
N
SPER_0000133001
Spirometra erinaceieuropaei
SPER_0000133001
N
SROB_0000200001
Schistosoma rodhaini
SROB_0000200001
N
SSLN_0001443801
Schistocephalus solidus
SSLN_0001443801
N
T265_12755
Opisthorchis viverrini
T265_12755
N
TASK_0000330801
Taenia asiatica
TASK_0000330801
N
TRE_0000429101
Trichobilharzia regenti
TRE_0000429101
N
TsM_000739800
Taenia solium
TsM_000739800
N
TTAC_0000958301
Hydatigera taeniaeformis
TTAC_0000958301
N