CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CG7045
(
Drosophila melanogaster
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0038978
T329518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG7046
M03980_2.00
Drosophila melanogaster
RWGGATTRCAGCAH
DTGCTGYAATCCWY
SELEX
Nitta et al.(2015)
CG7046_1
0.681
0.899
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0083651
Sox
8
77
PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEKLKQWN
Links
Other
Sox
family TFs
Other
Drosophila melanogaster
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG7046
Drosophila melanogaster
FBgn0038979
D
0.681
GM26441
Drosophila sechellia
FBgn0181294
I
0.645
GD20959
Drosophila simulans
FBgn0192415
I
0.593
GG11142
Drosophila erecta
FBgn0103443
I
0.483
GE10308
Drosophila yakuba
FBgn0228177
I
0.450