GLOINDRAFT_324308 (Rhizophagus irregularis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLOINDRAFT_324308 T330100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.432 0.299
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.432 0.299
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA10482 Sox 51 121

Links

Other Sox family TFs
Other Rhizophagus irregularis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07971 Capronia coronata A1O1_07971 I 0.434
A1O5_13042 Cladophialophora psammophila A1O5_13042 I 0.445
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N 0.417
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I 0.419
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N 0.424
CERSUDRAFT_118953 Ceriporiopsis subvermispora CERSUDRAFT_118953 N 0.437
CERSUDRAFT_61596 Ceriporiopsis subvermispora CERSUDRAFT_61596 N 0.417
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I 0.431
CH063_09403 Colletotrichum higginsianum CH063_09403 I 0.441
CY34DRAFT_811615 Suillus luteus CY34DRAFT_811615 N 0.447
DICSQDRAFT_18314 Dichomitus squalens DICSQDRAFT_18314 N 0.430
EPUS_08057 Endocarpon pusillum EPUS_08057 I 0.418
fgenesh1_pg.C_scaffold_2000484 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_2000484 N 0.437
fgenesh1_pg.C_scaffold_7000440 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000440 N 0.437
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I 0.422
FIBRA_08570 Fibroporia radiculosa FIBRA_08570 I 0.439
FOMPIDRAFT_1124101 Fomitopsis pinicola FOMPIDRAFT_1124101 N 0.422
FOMPIDRAFT_59166 Fomitopsis pinicola FOMPIDRAFT_59166 I 0.424
GLOTRDRAFT_98119 Gloeophyllum trabeum GLOTRDRAFT_98119 I 0.466
GYMLUDRAFT_43821 Gymnopus luxurians GYMLUDRAFT_43821 N 0.431
GYMLUDRAFT_71519 Gymnopus luxurians GYMLUDRAFT_71519 I 0.492
HMPREF1624_06196 Sporothrix schenckii HMPREF1624_06196 I 0.420
HYDPIDRAFT_99715 Hydnomerulius pinastri HYDPIDRAFT_99715 N 0.418
J056_002105 Wallemia ichthyophaga J056_002105 N 0.467
JAAARDRAFT_209433 Jaapia argillacea JAAARDRAFT_209433 I 0.436
M378DRAFT_85158 Amanita muscaria M378DRAFT_85158 N 0.437
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I 0.419
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I 0.419
Moror_5744 Moniliophthora roreri Moror_5744 N 0.430
MVLG_00275 Microbotryum violaceum MVLG_00275 N 0.431
MVLG_00343 Microbotryum violaceum MVLG_00343 N 0.417
PaG_02426 Pseudozyma aphidis PaG_02426 N 0.443
PAXINDRAFT_137714 Paxillus involutus PAXINDRAFT_137714 I 0.470
PAXRUDRAFT_827004 Paxillus rubicundulus PAXRUDRAFT_827004 N 0.431
PDE_01613 Penicillium oxalicum PDE_01613 I 0.418
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N 0.437
PHLGIDRAFT_121875 Phlebiopsis gigantea PHLGIDRAFT_121875 N 0.424
PILCRDRAFT_818013 Piloderma croceum PILCRDRAFT_818013 I 0.418
PISMIDRAFT_104531 Pisolithus microcarpus PISMIDRAFT_104531 I 0.437
PITC_063570 Penicillium italicum PITC_063570 I 0.446
PLEOSDRAFT_1104604 Pleurotus ostreatus PLEOSDRAFT_1104604 I 0.437
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I 0.476
PTRG_11789 Pyrenophora triticirepentis PTRG_11789 I 0.451
RHTO_08065 Rhodosporidium toruloides RHTO_08065 N 0.424
RTG_02343 Rhodotorula glutinis RTG_02343 N 0.417
SCHCODRAFT_255090 Schizophyllum commune SCHCODRAFT_255090 N 0.420
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I 0.436
SERLA73DRAFT_141654 Serpula lacrymans SERLA73DRAFT_141654 I 0.431
SERLA73DRAFT_84266 Serpula lacrymans SERLA73DRAFT_84266 I 0.442
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I 0.432
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D 0.432
SPBR_00669 Sporothrix brasiliensis SPBR_00669 I 0.420
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I 0.432
TSTA_008530 Talaromyces stipitatus TSTA_008530 I 0.415
U727_00429890111 Penicillium solitum U727_00429890111 I 0.446