CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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K443DRAFT_7978
(
Laccaria amethystina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
K443DRAFT_7978
T330756_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.417
0.391
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.417
0.391
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN
NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.417
0.391
ROX1
M11346_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.417
0.391
ROX1
M11347_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.417
0.391
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK00039
Sox
126
194
IPRPPNGFLMFRSHYMRNNTTPEANKLQNNLSKNAGIVWKKMSPEQQEPYYRLADIAKEEHRIMYPDYC
Links
Other
Sox
family TFs
Other
Laccaria amethystina
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
22516_YPR065W
Saccharomyces mikatae
22516_YPR065W
I
0.417
23192_YPR065W
Saccharomyces paradoxus
23192_YPR065W
I
0.417
AGABI2DRAFT_179892
Agaricus bisporus
AGABI2DRAFT_179892
N
0.433
AGABI2DRAFT_56847
Agaricus bisporus
AGABI2DRAFT_56847
N
0.431
CC1G_03536
Coprinopsis cinerea
CC1G_03536
N
0.416
CC1G_06427
Coprinopsis cinerea
CC1G_06427
N
0.499
CC1G_06994
Coprinopsis cinerea
CC1G_06994
I
0.454
CC1G_07617
Coprinopsis cinerea
CC1G_07617
I
0.446
CERSUDRAFT_118953
Ceriporiopsis subvermispora
CERSUDRAFT_118953
N
0.454
CERSUDRAFT_61596
Ceriporiopsis subvermispora
CERSUDRAFT_61596
N
0.415
CY34DRAFT_28710
Suillus luteus
CY34DRAFT_28710
I
0.417
CY34DRAFT_31998
Suillus luteus
CY34DRAFT_31998
I
0.446
CY34DRAFT_811615
Suillus luteus
CY34DRAFT_811615
N
0.442
DACRYDRAFT_24732
Dacryopinax sp
DACRYDRAFT_24732
N
0.460
DACRYDRAFT_31804
Dacryopinax sp
DACRYDRAFT_31804
I
0.422
DICSQDRAFT_18314
Dichomitus squalens
DICSQDRAFT_18314
N
0.447
E5Q_05542
Mixia osmundae
E5Q_05542
I
0.431
Ecym_1257
Eremothecium cymbalariae
Ecym_1257
I
0.415
fgenesh1_pg.C_scaffold_7000440
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000440
N
0.427
FIBRA_08093
Fibroporia radiculosa
FIBRA_08093
N
0.448
FOMPIDRAFT_59166
Fomitopsis pinicola
FOMPIDRAFT_59166
I
0.480
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
0.454
GLOTRDRAFT_28355
Gloeophyllum trabeum
GLOTRDRAFT_28355
I
0.461
GLOTRDRAFT_98119
Gloeophyllum trabeum
GLOTRDRAFT_98119
I
0.448
GYMLUDRAFT_162520
Gymnopus luxurians
GYMLUDRAFT_162520
I
0.445
GYMLUDRAFT_248699
Gymnopus luxurians
GYMLUDRAFT_248699
N
0.426
GYMLUDRAFT_43821
Gymnopus luxurians
GYMLUDRAFT_43821
N
0.454
H101_01550
Trichophyton interdigitale
H101_01550
I
0.422
HYDPIDRAFT_113320
Hydnomerulius pinastri
HYDPIDRAFT_113320
I
0.439
HYDPIDRAFT_99715
Hydnomerulius pinastri
HYDPIDRAFT_99715
N
0.442
JAAARDRAFT_117714
Jaapia argillacea
JAAARDRAFT_117714
I
0.416
JAAARDRAFT_209433
Jaapia argillacea
JAAARDRAFT_209433
I
0.486
K437DRAFT_265905
Tilletiaria anomala
K437DRAFT_265905
I
0.460
K443DRAFT_250430
Laccaria amethystina
K443DRAFT_250430
I
0.429
K443DRAFT_679736
Laccaria amethystina
K443DRAFT_679736
I
0.418
KAFR_0G02830
Kazachstania africana
KAFR_0G02830
I
0.415
KNAG_0H00720
Kazachstania naganishii
KNAG_0H00720
I
0.417
LACBIDRAFT_294333
Laccaria bicolor
LACBIDRAFT_294333
N
0.686
LACBIDRAFT_311738
Laccaria bicolor
LACBIDRAFT_311738
I
0.438
M378DRAFT_85158
Amanita muscaria
M378DRAFT_85158
N
0.454
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.448
M408DRAFT_328232
Serendipita vermifera
M408DRAFT_328232
N
0.485
M408DRAFT_330902
Serendipita vermifera
M408DRAFT_330902
N
0.440
M408DRAFT_332605
Serendipita vermifera
M408DRAFT_332605
N
0.485
M413DRAFT_24002
Hebeloma cylindrosporum
M413DRAFT_24002
I
0.465
MCYG_06419
Microsporum canis
MCYG_06419
I
0.422
MCYG_06419
Arthroderma otae
MCYG_06419
I
0.422
MGYG_06874
Microsporum gypseum
MGYG_06874
I
0.422
Moror_16414
Moniliophthora roreri
Moror_16414
I
0.462
Moror_17490
Moniliophthora roreri
Moror_17490
I
0.437
Moror_5744
Moniliophthora roreri
Moror_5744
N
0.445
Moror_6135
Moniliophthora roreri
Moror_6135
I
0.477
NCAS_0A11120
Naumovozyma castellii
NCAS_0A11120
I
0.417
PAXINDRAFT_137714
Paxillus involutus
PAXINDRAFT_137714
I
0.454
PAXINDRAFT_17515
Paxillus involutus
PAXINDRAFT_17515
I
0.439
PAXRUDRAFT_827004
Paxillus rubicundulus
PAXRUDRAFT_827004
N
0.454
PFL1_03871
Pseudozyma flocculosa
PFL1_03871
I
0.436
PHLGIDRAFT_121875
Phlebiopsis gigantea
PHLGIDRAFT_121875
N
0.420
PHLGIDRAFT_46949
Phlebiopsis gigantea
PHLGIDRAFT_46949
I
0.420
PIIN_00209
Piriformospora indica
PIIN_00209
N
0.440
PIIN_02385
Piriformospora indica
PIIN_02385
N
0.485
PILCRDRAFT_533337
Piloderma croceum
PILCRDRAFT_533337
I
0.439
PILCRDRAFT_818013
Piloderma croceum
PILCRDRAFT_818013
I
0.458
PISMIDRAFT_104531
Pisolithus microcarpus
PISMIDRAFT_104531
I
0.454
PLEOSDRAFT_1081881
Pleurotus ostreatus
PLEOSDRAFT_1081881
I
0.417
Scas_Contig667.28
Saccharomyces castellii
Scas_Contig667.28
I
0.417
SCHCODRAFT_111770
Schizophyllum commune
SCHCODRAFT_111770
I
0.442
SCHCODRAFT_113446
Schizophyllum commune
SCHCODRAFT_113446
I
0.442
SCHCODRAFT_114945
Schizophyllum commune
SCHCODRAFT_114945
I
0.442
SCHCODRAFT_255090
Schizophyllum commune
SCHCODRAFT_255090
N
0.418
SCHCODRAFT_255799
Schizophyllum commune
SCHCODRAFT_255799
N
0.452
SERLA73DRAFT_141654
Serpula lacrymans
SERLA73DRAFT_141654
I
0.448
SERLA73DRAFT_84266
Serpula lacrymans
SERLA73DRAFT_84266
I
0.492
SU7_3656
Saccharomyces arboricola
SU7_3656
I
0.417
TESG_05246
Trichophyton tonsurans
TESG_05246
I
0.422
UREG_05111
Uncinocarpus reesii
UREG_05111
I
0.428
ROX1
Saccharomyces cerevisiae
YPR065W
D
0.417
ZBAI_00389
Zygosaccharomyces bailii
ZBAI_00389
I
0.423
ZBAI_05541
Zygosaccharomyces bailii
ZBAI_05541
I
0.423