CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_330902
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_330902
T331036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM25904
Sox
98
165
VNRPPNAFIVFRRAQVQNMPANVTQHQQRISNLTALFWRVLTHSEQNTWYALSDDIKKLHSILFPDYN
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PIIN_00209
Piriformospora indica
PIIN_00209
N
0.741
M408DRAFT_328232
Serendipita vermifera
M408DRAFT_328232
N
0.476
M408DRAFT_332605
Serendipita vermifera
M408DRAFT_332605
N
0.476
PIIN_02385
Piriformospora indica
PIIN_02385
N
0.476
HelroG78096
Helobdella robusta
HelroG78096
I
0.466
CBG12840
Caenorhabditis briggsae
CBG12840
I
0.449
HelroG83985
Helobdella robusta
HelroG83985
I
0.447
CC1G_06427
Coprinopsis cinerea
CC1G_06427
N
0.446
ENSAMXG00000026062
Astyanax mexicanus
ENSAMXG00000026062
I
0.440
K443DRAFT_7978
Laccaria amethystina
K443DRAFT_7978
I
0.440
LACBIDRAFT_294333
Laccaria bicolor
LACBIDRAFT_294333
N
0.440
PHACADRAFT_54114
Phanerochaete carnosa
PHACADRAFT_54114
N
0.439
GALMADRAFT_1187634
Galerina marginata
GALMADRAFT_1187634
N
0.437
M413DRAFT_24002
Hebeloma cylindrosporum
M413DRAFT_24002
I
0.435
CC1G_08141
Coprinopsis cinerea
CC1G_08141
I
0.433
SOX15
Sorex araneus
ENSSARG00000006102
I
0.433
fgenesh1_pg.C_scaffold_2000484
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_2000484
N
0.429
HMEL008012
Heliconius melpomene
HMEL008012
I
0.427
FOMPIDRAFT_1124101
Fomitopsis pinicola
FOMPIDRAFT_1124101
N
0.423
CERSUDRAFT_118953
Ceriporiopsis subvermispora
CERSUDRAFT_118953
N
0.422
FIBRA_08093
Fibroporia radiculosa
FIBRA_08093
N
0.422
ISCW006248
Ixodes scapularis
ISCW006248
I
0.422
KGM_14720
Danaus plexippus
KGM_14720
I
0.422
tetur36g00420
Tetranychus urticae
tetur36g00420
I
0.422
BXY_0674500
Bursaphelenchus xylophilus
BXY_0674500
I
0.422
M378DRAFT_12668
Amanita muscaria
M378DRAFT_12668
N
0.420
ML047927a
Mnemiopsis leidyi
ML047927a
I
0.420
CC1G_03744
Coprinopsis cinerea
CC1G_03744
I
0.418
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
0.416
csin107154
Clonorchis sinensis
csin107154
I
0.416
T265_01843
Opisthorchis viverrini
T265_01843
I
0.416
EFV52295
Trichinella spiralis
EFV52295
I
0.415
M408DRAFT_11440
Serendipita vermifera
M408DRAFT_11440
I
0.415