CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
M408DRAFT_11440
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_11440
T331029_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.441
0.362
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.441
0.362
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN
NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.441
0.362
ROX1
M11346_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.441
0.362
ROX1
M11347_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.441
0.362
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM23628
Sox
73
145
IPRPRNPFILFRSQLLSQRAIPTQYVSFCADSRQISRIVSYVWKALPTHEKERFYQLSEEEKRLHQLRYPSYN
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
226 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCLCIDRAFT_81131
Scleroderma citrinum
SCLCIDRAFT_81131
I
0.529
MELLADRAFT_111305
Melampsora laricipopulina
MELLADRAFT_111305
I
0.512
NV14822
Nasonia vitripennis
NV14822
I
0.501
TC007345
Tribolium castaneum
TC007345
I
0.489
GLOINDRAFT_52776
Rhizophagus irregularis
GLOINDRAFT_52776
I
0.488
CERSUDRAFT_97591
Ceriporiopsis subvermispora
CERSUDRAFT_97591
N
0.475
L798_04766
Zootermopsis nevadensis
L798_04766
I
0.474
GALMADRAFT_33159
Galerina marginata
GALMADRAFT_33159
I
0.466
L798_11051
Zootermopsis nevadensis
L798_11051
I
0.464
PFL1_03871
Pseudozyma flocculosa
PFL1_03871
I
0.464
GB51010
Apis mellifera
GB51010
I
0.463
M378DRAFT_155487
Amanita muscaria
M378DRAFT_155487
I
0.462
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.459
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.459
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.458
JAAARDRAFT_33297
Jaapia argillacea
JAAARDRAFT_33297
I
0.458
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.458
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.458
tetur23g00840
Tetranychus urticae
tetur23g00840
I
0.457
CC1G_13679
Coprinopsis cinerea
CC1G_13679
I
0.457
BN946_scf184940.g27
Trametes cinnabarina
BN946_scf184940.g27
I
0.457
Moror_4724
Moniliophthora roreri
Moror_4724
I
0.456
CC1G_06994
Coprinopsis cinerea
CC1G_06994
I
0.456
Kpol_1062p60
Vanderwaltozyma polyspora
Kpol_1062p60
I
0.455
HelroG78096
Helobdella robusta
HelroG78096
I
0.455
GALMADRAFT_775072
Galerina marginata
GALMADRAFT_775072
I
0.455
AGABI2DRAFT_176060
Agaricus bisporus
AGABI2DRAFT_176060
I
0.455
PLEOSDRAFT_1081694
Pleurotus ostreatus
PLEOSDRAFT_1081694
I
0.453
CIMG_12783
Coccidioides immitis
CIMG_12783
I
0.452
PIIN_01973
Piriformospora indica
PIIN_01973
I
0.452
CPC735_049570
Coccidioides posadasii
CPC735_049570
I
0.452
L798_09327
Zootermopsis nevadensis
L798_09327
I
0.452
BOTBODRAFT_190207
Botryobasidium botryosum
BOTBODRAFT_190207
I
0.451
SCHCODRAFT_230584
Schizophyllum commune
SCHCODRAFT_230584
I
0.450
TBLA_0J01680
Tetrapisispora blattae
TBLA_0J01680
I
0.449
SMAR001063
Strigamia maritima
SMAR001063
I
0.449
BN7_1833
Wickerhamomyces ciferrii
BN7_1833
I
0.449
Kpol_401p4
Vanderwaltozyma polyspora
Kpol_401p4
I
0.449
L798_14304
Zootermopsis nevadensis
L798_14304
I
0.449
e_gw1.12.557.1
Heterobasidion annosum
e_gw1.12.557.1
I
0.448
FOMPIDRAFT_1048193
Fomitopsis pinicola
FOMPIDRAFT_1048193
I
0.448
HETIRDRAFT_55525
Heterobasidion irregulare
HETIRDRAFT_55525
I
0.448
TPHA_0C01510
Tetrapisispora phaffii
TPHA_0C01510
I
0.448
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.448
JL09_g4172
Pichia kudriavzevii
JL09_g4172
I
0.447
CAGL0D05434g
Candida glabrata
CAGL0D05434g
I
0.447
HCBG_03464
Histoplasma capsulatum
HCBG_03464
I
0.446
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
0.446
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
0.446
FOMPIDRAFT_111082
Fomitopsis pinicola
FOMPIDRAFT_111082
N
0.446
BDDG_02246
Blastomyces dermatitidis
BDDG_02246
I
0.446
HCBG_03514
Histoplasma capsulatum
HCBG_03514
I
0.446
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
0.446
PAAG_02636
Paracoccidioides sp lutzii
PAAG_02636
I
0.445
GLOINDRAFT_47695
Rhizophagus irregularis
GLOINDRAFT_47695
I
0.445
fgeneshMC_pg.8_#_228
Mucor circinelloides
fgeneshMC_pg.8_#_228
I
0.444
TDEL_0C04960
Torulaspora delbrueckii
TDEL_0C04960
I
0.444
PGTG_06975
Puccinia graminis
PGTG_06975
I
0.442
JAAARDRAFT_62109
Jaapia argillacea
JAAARDRAFT_62109
I
0.442
M378DRAFT_85158
Amanita muscaria
M378DRAFT_85158
N
0.442
ROX1
Saccharomyces cerevisiae
YPR065W
D
0.441
FOMPIDRAFT_114445
Fomitopsis pinicola
FOMPIDRAFT_114445
I
0.440
ZBAI_06138
Zygosaccharomyces bailii
ZBAI_06138
I
0.440
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
0.440
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
0.440
ZYRO0D15312g
Zygosaccharomyces rouxii
ZYRO0D15312g
I
0.440
TsM_000188900
Taenia solium
TsM_000188900
I
0.440
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
0.440
CMQ_1586
Grosmannia clavigera
CMQ_1586
I
0.439
fgeneshMC_pg.7_#_500
Mucor circinelloides
fgeneshMC_pg.7_#_500
I
0.439
PABG_03121
Paracoccidioides brasiliensis
PABG_03121
I
0.439
PISMIDRAFT_31667
Pisolithus microcarpus
PISMIDRAFT_31667
I
0.438
PAXRUDRAFT_106123
Paxillus rubicundulus
PAXRUDRAFT_106123
I
0.438
UV8b_664
Ustilaginoidea virens
UV8b_664
I
0.436
X797_008883
Metarhizium robertsii
X797_008883
I
0.436
MAC_07229
Metarhizium acridum
MAC_07229
I
0.436
VHEMI05549
Torrubiella hemipterigena
VHEMI05549
I
0.436
YQE_11555
Dendroctonus ponderosae
YQE_11555
I
0.436
PSEUBRA_SCAF20g03099
Pseudozyma brasiliensis
PSEUBRA_SCAF20g03099
N
0.436
MBR_05099
Metarhizium brunneum
MBR_05099
I
0.436
MAJ_07256
Metarhizium majus
MAJ_07256
I
0.436
MANI_017634
Metarhizium anisopliae
MANI_017634
I
0.436
M407DRAFT_45884
Tulasnella calospora
M407DRAFT_45884
I
0.436
MGU_01572
Metarhizium guizhouense
MGU_01572
I
0.436
CCM_04586
Cordyceps militaris
CCM_04586
I
0.436
BBA_05443
Beauveria bassiana
BBA_05443
I
0.436
CPUR_06949
Claviceps purpurea
CPUR_06949
I
0.436
GALMADRAFT_213842
Galerina marginata
GALMADRAFT_213842
I
0.436
CPAG_04451
Candida parapsilosis
CPAG_04451
I
0.435
PIIN_06327
Piriformospora indica
PIIN_06327
I
0.435
HelroG147528
Helobdella robusta
HelroG147528
I
0.435
M378DRAFT_12668
Amanita muscaria
M378DRAFT_12668
N
0.435
GLOINDRAFT_81833
Rhizophagus irregularis
GLOINDRAFT_81833
N
0.435
22516_YPR065W
Saccharomyces mikatae
22516_YPR065W
I
0.434
GLRG_08663
Colletotrichum graminicola
GLRG_08663
I
0.434
Scas_Contig667.28
Saccharomyces castellii
Scas_Contig667.28
I
0.434
Cob_03892
Colletotrichum orbiculare
Cob_03892
I
0.434
SU7_3656
Saccharomyces arboricola
SU7_3656
I
0.434
NCAS_0A11120
Naumovozyma castellii
NCAS_0A11120
I
0.434
DACRYDRAFT_31804
Dacryopinax sp
DACRYDRAFT_31804
I
0.434
CGGC5_2884
Colletotrichum gloeosporioides
CGGC5_2884
I
0.434
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.434
KNAG_0H00720
Kazachstania naganishii
KNAG_0H00720
I
0.434
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.434
23192_YPR065W
Saccharomyces paradoxus
23192_YPR065W
I
0.434
MAT2
Aspergillus nidulans
CADANIAG00005695
I
0.434
KAFR_0H00950
Kazachstania africana
KAFR_0H00950
I
0.434
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.433
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.433
ZBAI_00827
Zygosaccharomyces bailii
ZBAI_00827
I
0.432
PLEOSDRAFT_1081881
Pleurotus ostreatus
PLEOSDRAFT_1081881
I
0.432
PHACADRAFT_252287
Phanerochaete carnosa
PHACADRAFT_252287
I
0.432
PHACADRAFT_30138
Phanerochaete carnosa
PHACADRAFT_30138
I
0.432
estExt_fgenesh2_pg.C_150134
Heterobasidion annosum
estExt_fgenesh2_pg.C_150134
I
0.431
HETIRDRAFT_444436
Heterobasidion irregulare
HETIRDRAFT_444436
I
0.431
PLEOSDRAFT_12123
Pleurotus ostreatus
PLEOSDRAFT_12123
I
0.431
OCS_05413
Ophiocordyceps sinensis
OCS_05413
I
0.430
FOXG_07900
Fusarium oxysporum
FOXG_07900
I
0.429
FGRRES_05151
Fusarium graminearum
FGRRES_05151
I
0.429
FVEG_04822
Fusarium verticillioides
FVEG_04822
I
0.429
FPSE_06551
Fusarium pseudograminearum
FPSE_06551
I
0.429
FFUJ_13386
Fusarium fujikuroi
FFUJ_13386
I
0.429
GLOINDRAFT_25061
Rhizophagus irregularis
GLOINDRAFT_25061
I
0.428
Moror_16360
Moniliophthora roreri
Moror_16360
I
0.428
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.427
NFIA_024390
Neosartorya fischeri
CADNFIAG00002255
I
0.427
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.427
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.427
CH063_08155
Colletotrichum higginsianum
CH063_08155
I
0.427
M413DRAFT_289523
Hebeloma cylindrosporum
M413DRAFT_289523
I
0.427
OIDMADRAFT_143853
Oidiodendron maius
OIDMADRAFT_143853
I
0.427
A1O7_00275
Cladophialophora yegresii
A1O7_00275
I
0.426
PV06_03562
Exophiala oligosperma
PV06_03562
I
0.426
PV08_05977
Exophiala spinifera
PV08_05977
I
0.426
PV05_11046
Exophiala xenobiotica
PV05_11046
I
0.426
Z517_08752
Fonsecaea pedrosoi
Z517_08752
I
0.426
PV11_08420
Exophiala sideris
PV11_08420
I
0.426
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.426
GLOINDRAFT_44351
Rhizophagus irregularis
GLOINDRAFT_44351
I
0.425
fgenesh1_pg.C_scaffold_7000434
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000434
I
0.425
BAUCODRAFT_72427
Baudoinia compniacensis
BAUCODRAFT_72427
I
0.425
GLOINDRAFT_346310
Rhizophagus irregularis
GLOINDRAFT_346310
I
0.425
GALMADRAFT_252018
Galerina marginata
GALMADRAFT_252018
N
0.425
PILCRDRAFT_533337
Piloderma croceum
PILCRDRAFT_533337
I
0.425
PFICI_11445
Pestalotiopsis fici
PFICI_11445
I
0.425
CC1G_08141
Coprinopsis cinerea
CC1G_08141
I
0.424
XP_002160058.1
Hydra magnipapillata
XP_002160058.1
I
0.424
AGABI2DRAFT_46840
Agaricus bisporus
AGABI2DRAFT_46840
I
0.424
NechaG106035
Fusarium solani
NechaG106035
I
0.423
fgeneshN1_pm.sca_3_chr4_2_0000013
Nectria haematococca
fgeneshN1_pm.sca_3_chr4_2_0000013
I
0.423
CORT_0A01160
Candida orthopsilosis
CORT_0A01160
I
0.423
H101_01550
Trichophyton interdigitale
H101_01550
I
0.422
GSTUM_00008644001
Tuber melanosporum
GSTUM_00008644001
I
0.422
GYMLUDRAFT_162520
Gymnopus luxurians
GYMLUDRAFT_162520
I
0.422
T265_06704
Opisthorchis viverrini
T265_06704
I
0.421
csin105999
Clonorchis sinensis
csin105999
I
0.421
V565_234600
Rhizoctonia solani
V565_234600
I
0.421
SCHCODRAFT_255799
Schizophyllum commune
SCHCODRAFT_255799
N
0.421
GLOINDRAFT_46580
Rhizophagus irregularis
GLOINDRAFT_46580
I
0.421
S40285_03081
Stachybotrys chlorohalonata
S40285_03081
I
0.421
PV09_07372
Verruconis gallopava
PV09_07372
I
0.421
fgeneshTM_pg.8_#_254
Tremella mesenterica
fgeneshTM_pg.8_#_254
I
0.420
GNLVRS01_PISO0L11913g
Millerozyma farinosa
GNLVRS01_PISO0L11913g
I
0.420
LELG_00108
Lodderomyces elongisporus
LELG_00108
I
0.420
G647_00298
Cladophialophora carrionii
G647_00298
I
0.420
estExt_fgenesh1_pg.C_chr_3.10092
Pichia stipitis
estExt_fgenesh1_pg.C_chr_3.10092
I
0.420
PV07_10630
Cladophialophora immunda
PV07_10630
I
0.420
AFUA_3G06170
Aspergillus fumigatus
CADAFUAG00005478
I
0.420
GNLVRS01_PISO0K11912g
Millerozyma farinosa
GNLVRS01_PISO0K11912g
I
0.420
G210_0578
Candida maltosa
G210_0578
I
0.420
A1O5_04108
Cladophialophora psammophila
A1O5_04108
I
0.420
A1O3_02036
Capronia epimyces
A1O3_02036
I
0.420
A1O1_00170
Capronia coronata
A1O1_00170
I
0.420
PICST_67218
Scheffersomyces stipitis
PICST_67218
I
0.420
HMPREF1120_05727
Exophiala dermatitidis
HMPREF1120_05727
I
0.420
CD36_27640
Candida dubliniensis
CD36_27640
I
0.420
PGUG_05440
Meyerozyma guilliermondii
PGUG_05440
I
0.420
PHLGIDRAFT_121875
Phlebiopsis gigantea
PHLGIDRAFT_121875
N
0.420
PV04_01817
Capronia semiimmersa
PV04_01817
I
0.420
CaO19.10341
Candida albicans
CaO19.10341
I
0.420
PV10_01892
Exophiala mesophila
PV10_01892
I
0.420
DEHA2E09460g
Debaryomyces hansenii
DEHA2E09460g
I
0.420
CNG02110
Cryptococcus neoformans
CNG02110
I
0.420
CTRG_00834
Candida tropicalis
CTRG_00834
I
0.420
PGUG_05440
Candida guilliermondii
PGUG_05440
I
0.420
Z518_08063
Rhinocladiella mackenziei
Z518_08063
I
0.420
SPAPADRAFT_59824
Spathaspora passalidarum
SPAPADRAFT_59824
I
0.420
Z519_03381
Cladophialophora bantiana
Z519_03381
I
0.420
gw1.11.527.1
Heterobasidion annosum
gw1.11.527.1
I
0.419
gw1.11.531.1
Heterobasidion annosum
gw1.11.531.1
I
0.419
HETIRDRAFT_18769
Heterobasidion irregulare
HETIRDRAFT_18769
I
0.419
HETIRDRAFT_18788
Heterobasidion irregulare
HETIRDRAFT_18788
I
0.419
PPAI002806
Phlebotomus papatasi
PPAI002806
I
0.419
SAKL0B07656g
Lachancea kluyveri
SAKL0B07656g
I
0.419
GLOINDRAFT_47482
Rhizophagus irregularis
GLOINDRAFT_47482
N
0.419
M404DRAFT_69899
Pisolithus tinctorius
M404DRAFT_69899
I
0.419
YALI0_B02266g
Yarrowia lipolytica
YALI0_B02266g
I
0.418
PISMIDRAFT_36586
Pisolithus microcarpus
PISMIDRAFT_36586
I
0.418
PHUM605170
Pediculus humanus
PHUM605170
I
0.418
GSTUM_00001090001
Tuber melanosporum
GSTUM_00001090001
I
0.418
JAAARDRAFT_113690
Jaapia argillacea
JAAARDRAFT_113690
I
0.418
M404DRAFT_159338
Pisolithus tinctorius
M404DRAFT_159338
I
0.418
FOMPIDRAFT_59166
Fomitopsis pinicola
FOMPIDRAFT_59166
I
0.417
AGOS_ADL331C
Ashbya gossypii
AGOS_ADL331C
I
0.417
YALI0_D22660g
Yarrowia lipolytica
YALI0_D22660g
I
0.417
HPODL_00225
Ogataea parapolymorpha
HPODL_00225
I
0.417
Cflo_05874--XP_001121937.1_APIME
Camponotus floridanus
Cflo_05874--XP_001121937.1_APIME
I
0.417
AACERI_AaceriADL331C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL331C
I
0.417
Ecym_3473
Eremothecium cymbalariae
Ecym_3473
I
0.417
LACBIDRAFT_327972
Laccaria bicolor
LACBIDRAFT_327972
I
0.416
PaG_05617
Pseudozyma aphidis
PaG_05617
N
0.416
GK10637
Drosophila willistoni
FBgn0212650
I
0.416
ML040423a
Mnemiopsis leidyi
ML040423a
I
0.416
E5Q_00699
Mixia osmundae
E5Q_00699
I
0.416
PAN0_018c5621
Pseudozyma antarctica
PAN0_018c5621
N
0.416
PIIN_00209
Piriformospora indica
PIIN_00209
N
0.415
TTAC_0000092501
Hydatigera taeniaeformis
TTAC_0000092501
I
0.415
TsM_000714900
Taenia solium
TsM_000714900
I
0.415
TASK_0000873701
Taenia asiatica
TASK_0000873701
I
0.415
GALMADRAFT_137502
Galerina marginata
GALMADRAFT_137502
N
0.415
EmuJ_000232900
Echinococcus multilocularis
EmuJ_000232900
I
0.415
GALMADRAFT_243779
Galerina marginata
GALMADRAFT_243779
N
0.415
RHTO_04522
Rhodosporidium toruloides
RHTO_04522
I
0.415
UCREL1_7053
Eutypa lata
UCREL1_7053
I
0.415
M408DRAFT_330902
Serendipita vermifera
M408DRAFT_330902
N
0.415
ECANG7_06280
Echinococcus canadensis
ECANG7_06280
I
0.415