CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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M408DRAFT_22846
(
Serendipita vermifera
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
M408DRAFT_22846
T331031_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM29491
Sox
265
329
VPRPPNAWILFRSTMSKSRRPDGIVYSPPEISVMWKNLNTAEREVWFDRAKEAKQQHEVANPGYK
Links
Other
Sox
family TFs
Other
Serendipita vermifera
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_020880
Acremonium chrysogenum
ACRE_020880
N
0.450
AGABI2DRAFT_179892
Agaricus bisporus
AGABI2DRAFT_179892
N
0.415
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
0.439
CC1G_08141
Coprinopsis cinerea
CC1G_08141
I
0.432
CC1G_11980
Coprinopsis cinerea
CC1G_11980
I
0.425
csin105999
Clonorchis sinensis
csin105999
I
0.432
FIBRA_03355
Fibroporia radiculosa
FIBRA_03355
I
0.423
GALMADRAFT_133211
Galerina marginata
GALMADRAFT_133211
I
0.441
GALMADRAFT_246110
Galerina marginata
GALMADRAFT_246110
I
0.420
GLOINDRAFT_26890
Rhizophagus irregularis
GLOINDRAFT_26890
N
0.446
GLOINDRAFT_47695
Rhizophagus irregularis
GLOINDRAFT_47695
I
0.423
gw1.11.527.1
Heterobasidion annosum
gw1.11.527.1
I
0.422
gw1.11.531.1
Heterobasidion annosum
gw1.11.531.1
I
0.422
gw1.15.230.1
Heterobasidion annosum
gw1.15.230.1
N
0.423
HETIRDRAFT_18749
Heterobasidion irregulare
HETIRDRAFT_18749
N
0.423
HETIRDRAFT_18769
Heterobasidion irregulare
HETIRDRAFT_18769
I
0.422
HETIRDRAFT_18788
Heterobasidion irregulare
HETIRDRAFT_18788
I
0.422
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.438
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.438
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.445
M407DRAFT_219396
Tulasnella calospora
M407DRAFT_219396
N
0.430
M413DRAFT_445326
Hebeloma cylindrosporum
M413DRAFT_445326
I
0.420
M422DRAFT_195883
Sphaerobolus stellatus
M422DRAFT_195883
N
0.424
Moror_2734
Moniliophthora roreri
Moror_2734
I
0.417
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
0.430
NDAI_0A05180
Naumovozyma dairenensis
NDAI_0A05180
I
0.451
Pc18g06680
Penicillium chrysogenum
Pc18g06680
I
0.431
PCH_Pc18g06680
Penicillium rubens
PCH_Pc18g06680
I
0.431
PTT_09966
Pyrenophora teres
PTT_09966
N
0.415
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.425
SCHCODRAFT_107892
Schizophyllum commune
SCHCODRAFT_107892
N
0.428
SCHCODRAFT_111683
Schizophyllum commune
SCHCODRAFT_111683
N
0.468
SCHCODRAFT_238903
Schizophyllum commune
SCHCODRAFT_238903
I
0.437
SERLA73DRAFT_18452
Serpula lacrymans
SERLA73DRAFT_18452
I
0.456
T265_06704
Opisthorchis viverrini
T265_06704
I
0.432
UCREL1_753
Eutypa lata
UCREL1_753
N
0.426