CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

NCAS_0A04790 *(Naumovozyma castellii)* Sox
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00505 (HMG_box)	IPR000910	NCAS_0A04790	T331433_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
IXR1 M08429_2.00	Saccharomyces cerevisiae	CMCCGCTYCCGGYTT	AARCCGGRAGCGGKG	ChIP-chip Mathelier et al.(2014) MA0323.1	0.706	0.897
IXR1 M11345_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$IXR1_01	0.706	0.897
For this family, TFs with SR scores > 0.415* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CCC67037	Sox	343	411	PKRPSSAYFLFSMSIRNELLEQFPDAKVPELSKLASARWKELTDDEKKPFYEEFRTNWEKYRLLRDEYE
CCC67037	Sox	416	482	PKRPSGPFIQFTQEIRPTIVKENPDKNLIEITKIIGEKWRELDPEKKAAYTETYKRRLKEWEKCYPE

Links
Other Sox family TFs
Other *Naumovozyma castellii* TFs