Phatr3_J50240 (Phaeodactylum tricornutum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Phatr3_J50240 T331931_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Phatr3_J50240.p1 Sox 28 55
Phatr3_J50240.p1 Sox 70 126

Links

Other Sox family TFs
Other Phaeodactylum tricornutum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB003415 Anopheles albimanus AALB003415 I
AALB007457 Anopheles albimanus AALB007457 I
Aan_R004615 Calypte anna Aan_R004615 I
Aan_R006371 Calypte anna Aan_R006371 I
AARA002062 Anopheles arabiensis AARA002062 I
AARA004503 Anopheles arabiensis AARA004503 I
AATE005508 Anopheles atroparvus AATE005508 I
AATE016576 Anopheles atroparvus AATE016576 I
ACOM034376 Anopheles coluzzii ACOM034376 I
ACOM037084 Anopheles coluzzii ACOM037084 I
ADIR002611 Anopheles dirus ADIR002611 I
ADIR009852 Anopheles dirus ADIR009852 I
ADIR014786 Anopheles dirus ADIR014786 I
AEPI003799 Anopheles epiroticus AEPI003799 I
AFAF003113 Anopheles farauti AFAF003113 I
Afo_R001648 Aptenodytes forsteri Afo_R001648 I
Afo_R002824 Aptenodytes forsteri Afo_R002824 I
Afo_R010037 Aptenodytes forsteri Afo_R010037 I
AFUN006854 Anopheles funestus AFUN006854 I
AGAP012501 Anopheles gambiae AGAP012501 I
Alligator_sinensis_CCG014612.1 Alligator sinensis Alligator_sinensis_CCG014612.1 I
Alligator_sinensis_CCG017947.1 Alligator sinensis Alligator_sinensis_CCG017947.1 I
AMEC008017 Anopheles melas AMEC008017 I
AMEC009924 Anopheles melas AMEC009924 I
AMEM005429 Anopheles merus AMEM005429 I
AMEM018184 Anopheles merus AMEM018184 I
AMIN000129 Anopheles minimus AMIN000129 I
AMIN004680 Anopheles minimus AMIN004680 I
AMIN007516 Anopheles minimus AMIN007516 I
Aqu1.203581 Amphimedon queenslandica Aqu1.203581 I
Aqu1.204705 Amphimedon queenslandica Aqu1.204705 I
Aqu1.224590 Amphimedon queenslandica Aqu1.224590 I
AQUA000483 Anopheles quadriannulatus AQUA000483 I
AQUA009592 Anopheles quadriannulatus AQUA009592 I
ASIS019066 Anopheles sinensis ASIS019066 I
ASTEI04317 Anopheles stephensi ASTEI04317 I
BGIBMGA011837 Bombyx mori BGIBMGA011837 I
Brh_R005100 Buceros rhinoceros Brh_R005100 I
CapteG160905 Capitella teleta CapteG160905 I
CapteG29553 Capitella teleta CapteG29553 I
CapteG80769 Capitella teleta CapteG80769 I
Cflo_09380--XP_001120883.1_APIME Camponotus floridanus Cflo_09380--XP_001120883.1_APIME I
Cflo_11297--XP_001122113.1_APIME Camponotus floridanus Cflo_11297--XP_001122113.1_APIME I
Cflo_12808--XP_001122269.1_APIME Camponotus floridanus Cflo_12808--XP_001122269.1_APIME I
Cflo_13663--XP_396835.3_APIME Camponotus floridanus Cflo_13663--XP_396835.3_APIME I
CGI_10021920 Crassostrea gigas CGI_10021920 I
CLEC002808 Cimex lectularius CLEC002808 I
CLEC004403 Cimex lectularius CLEC004403 I
CLEC012737 Cimex lectularius CLEC012737 I
Cmyd_10002310 Chelonia mydas Cmyd_10002310 I
Cmyd_10011392 Chelonia mydas Cmyd_10011392 I
Cmyd_10017178 Chelonia mydas Cmyd_10017178 I
csin108665 Clonorchis sinensis csin108665 I
DAPPUDRAFT_28152 Daphnia pulex DAPPUDRAFT_28152 I
ECANG7_05492 Echinococcus canadensis ECANG7_05492 I
EmuJ_000394900 Echinococcus multilocularis EmuJ_000394900 I
DNMT1 Anolis carolinensis ENSACAG00000003948 I
ENSAMEG00000006432 Ailuropoda melanoleuca ENSAMEG00000006432 I
ENSAMEG00000011823 Ailuropoda melanoleuca ENSAMEG00000011823 I
ENSAMXG00000012182 Astyanax mexicanus ENSAMXG00000012182 I
DNMT1 Bos taurus ENSBTAG00000002736 I
DNMT1 Canis familiaris ENSCAFG00000017892 I
DNMT1 Choloepus hoffmanni ENSCHOG00000009490 I
DNMT1 Callithrix jacchus ENSCJAG00000005794 I
VAX2 Callithrix jacchus ENSCJAG00000031540 I
DNMT1 Cavia porcellus ENSCPOG00000019557 I
ENSCSAG00000007378 Chlorocebus sabaeus ENSCSAG00000007378 I
dnmt1 Danio rerio ENSDARG00000030756 I
DNMT1 Dasypus novemcinctus ENSDNOG00000003313 I
Dnmt1 Dipodomys ordii ENSDORG00000014116 I
DNMT1 Equus caballus ENSECAG00000026909 I
DNMT1 Echinops telfairi ENSETEG00000012574 I
ENSFALG00000007760 Ficedula albicollis ENSFALG00000007760 I
BARHL1 Felis catus ENSFCAG00000007105 I
DNMT1 Felis catus ENSFCAG00000012246 I
DNMT1 Homo sapiens ENSG00000130816 D
ENSGACG00000009430 Gasterosteus aculeatus ENSGACG00000009430 I
dnmt1 Gasterosteus aculeatus ENSGACG00000013741 I
ENSGALG00000028997 Gallus gallus ENSGALG00000028997 I
DNMT1 Gorilla gorilla ENSGGOG00000016574 I
ENSGMOG00000003491 Gadus morhua ENSGMOG00000003491 I
ENSGMOG00000007903 Gadus morhua ENSGMOG00000007903 I
DNMT1 Loxodonta africana ENSLAFG00000002818 I
TLX2 Loxodonta africana ENSLAFG00000018364 I
ENSLOCG00000007421 Lepisosteus oculatus ENSLOCG00000007421 I
ENSMEUG00000009949 Macropus eugenii ENSMEUG00000009949 I
ENSMEUG00000012650 Macropus eugenii ENSMEUG00000012650 I
DNMT1 Microcebus murinus ENSMICG00000010231 I
DNMT1 Myotis lucifugus ENSMLUG00000001347 I
DNMT1 Macaca mulatta ENSMMUG00000014604 I
DNMT1 Monodelphis domestica ENSMODG00000005463 I
ENSMODG00000017979 Monodelphis domestica ENSMODG00000017979 I
ENSMPUG00000006829 Mustela putorius furo ENSMPUG00000006829 I
Dnmt1 Mus musculus ENSMUSG00000004099 I
ENSNLEG00000012092 Nomascus leucogenys ENSNLEG00000012092 I
ENSOANG00000012255 Ornithorhynchus anatinus ENSOANG00000012255 I
ENSOARG00000015380 Ovis aries ENSOARG00000015380 I
ENSOCUG00000008415 Oryctolagus cuniculus ENSOCUG00000008415 I
DNMT1 Otolemur garnettii ENSOGAG00000001265 I
ENSONIG00000001574 Oreochromis niloticus ENSONIG00000001574 I
DNMT1 Ochotona princeps ENSOPRG00000007032 I
dnmt1 Oryzias latipes ENSORLG00000005582 I
ENSORLG00000012370 Oryzias latipes ENSORLG00000012370 I
ENSP00000352516 Macaca fascicularis ENSP00000352516 I
ENSP00000352516-D1 Bos grunniens ENSP00000352516-D1 I
ENSP00000358202 Macaca fascicularis ENSP00000358202 I
ENSP00000358202-D1 Bos grunniens ENSP00000358202-D1 I
ENSPANG00000001264 Papio anubis ENSPANG00000001264 I
ENSPCAG00000004179 Procavia capensis ENSPCAG00000004179 I
DNMT1 Procavia capensis ENSPCAG00000011023 I
ENSPFOG00000005624 Poecilia formosa ENSPFOG00000005624 I
ENSPMAG00000002148 Petromyzon marinus ENSPMAG00000002148 I
ENSPPYG00000009545 Pongo abelii ENSPPYG00000009545 I
ENSPSIG00000002916 Pelodiscus sinensis ENSPSIG00000002916 I
DNMT1 Pan troglodytes ENSPTRG00000010461 I
DNMT1 Pteropus vampyrus ENSPVAG00000003676 I
ENSPVAG00000011613 Pteropus vampyrus ENSPVAG00000011613 I
Dnmt1 Rattus norvegicus ENSRNOG00000039859 I
ENSSHAG00000004362 Sarcophilus harrisii ENSSHAG00000004362 I
ENSSHAG00000008894 Sarcophilus harrisii ENSSHAG00000008894 I
DNMT1 Sus scrofa ENSSSCG00000013659 I
ENSSTOG00000010841 Ictidomys tridecemlineatus ENSSTOG00000010841 I
ENSTGUG00000013708 Taeniopygia guttata ENSTGUG00000013708 I
ENSTNIG00000005484 Tetraodon nigroviridis ENSTNIG00000005484 I
hmx3a Tetraodon nigroviridis ENSTNIG00000013351 I
dnmt1 Tetraodon nigroviridis ENSTNIG00000018567 I
dnmt1 Takifugu rubripes ENSTRUG00000008132 I
DNMT1 Tursiops truncatus ENSTTRG00000003178 I
BARHL1 Tursiops truncatus ENSTTRG00000014090 I
DNMT1 Vicugna pacos ENSVPAG00000006117 I
ENSXMAG00000018063 Xiphophorus maculatus ENSXMAG00000018063 I
estExt_fgenesh2_pg.C_2100001 Branchiostoma floridae estExt_fgenesh2_pg.C_2100001 I
estExt_gwp.C_2590007 Branchiostoma floridae estExt_gwp.C_2590007 I
OdsH Drosophila sechellia FBgn0026109 I
GK13741 Drosophila willistoni FBgn0215749 I
GB47348 Apis mellifera GB47348 I
GB48403 Apis mellifera GB48403 I
Gfo_R002685 Geospiza fortis Gfo_R002685 I
Gfo_R014727 Geospiza fortis Gfo_R014727 I
HCOI02067700 Haemonchus contortus HCOI02067700 I
HDID_0000029301 Hymenolepis diminuta HDID_0000029301 I
HelroG116156 Helobdella robusta HelroG116156 I
HMEL004582 Heliconius melpomene HMEL004582 I
HmN_000638300 Hymenolepis microstoma HmN_000638300 I
HNAJ_0001006601 Hymenolepis nana HNAJ_0001006601 I
HPLM_0000567701 Haemonchus placei HPLM_0000567701 I
Hsal_01309--XP_001120883.1_APIME Harpegnathos saltator Hsal_01309--XP_001120883.1_APIME I
Hsal_12039--XP_396835.3_APIME Harpegnathos saltator Hsal_12039--XP_396835.3_APIME I
KGM_17721 Danaus plexippus KGM_17721 I
KLTH0F09636g Lachancea thermotolerans KLTH0F09636g I
KLTH0F09636g Kluyveromyces thermotolerans KLTH0F09636g I
Kwal_3494 Kluyveromyces waltii Kwal_3494 I
L889_g5750 Steinernema feltiae L889_g5750 I
L893_g26530 Steinernema glaseri L893_g26530 I
L898_g35957 Steinernema monticolum L898_g35957 I
LALA0_S03e04016g Lachancea lanzarotensis LALA0_S03e04016g I
LCUP015082 Lucilia cuprina LCUP015082 I
LDEC016261 Leptinotarsa decemlineata LDEC016261 I
LLOJ002195 Lutzomyia longipalpis LLOJ002195 I
LLOJ005414 Lutzomyia longipalpis LLOJ005414 I
LotgiG171288 Lottia gigantea LotgiG171288 I
LotgiG89067 Lottia gigantea LotgiG89067 I
MCINX016053 Melitaea cinxia MCINX016053 I
MCOS_0000216701 Mesocestoides corti MCOS_0000216701 I
MDOA003511 Musca domestica MDOA003511 I
MDOA008856 Musca domestica MDOA008856 I
ML04966a Mnemiopsis leidyi ML04966a I
Myotis_brandtii_DNMT1_10007965 Myotis brandtii Myotis_brandtii_DNMT1_10007965 I
Myotis_brandtii_EMX2_10024925 Myotis brandtii Myotis_brandtii_EMX2_10024925 I
NEMVEDRAFT_v1g125496 Nematostella vectensis NEMVEDRAFT_v1g125496 I
nOo.2.0.1.g09747 Onchocerca ochengi nOo.2.0.1.g09747 I
NV11649 Nasonia vitripennis NV11649 I
O9G_003621 Rozella allomycis O9G_003621 I
Ocbimv22034501m.g Octopus bimaculoides Ocbimv22034501m.g I
Ogr12994 Ophisaurus gracilis Ogr12994 I
Ogr16573 Ophisaurus gracilis Ogr16573 I
PHUM050850 Pediculus humanus PHUM050850 I
PPAI003800 Phlebotomus papatasi PPAI003800 I
PPAI008153 Phlebotomus papatasi PPAI008153 I
Pvit_03471 Pogona vitticeps Pvit_03471 I
Pvit_11669 Pogona vitticeps Pvit_11669 I
Sakowv30004224m.g Saccoglossus kowalevskii Sakowv30004224m.g I
Sakowv30005306m.g Saccoglossus kowalevskii Sakowv30005306m.g I
Sakowv30007560m.g Saccoglossus kowalevskii Sakowv30007560m.g I
Sakowv30018456m.g Saccoglossus kowalevskii Sakowv30018456m.g I
scaffold258-EXSNAP2012.18 Pristionchus exspectatus scaffold258-EXSNAP2012.18 I
SMAR007945 Strigamia maritima SMAR007945 I
SNAPOd2T00013469001 Oikopleura dioica SNAPOd2T00013469001 I
SPER_0002969301 Spirometra erinaceieuropaei SPER_0002969301 I
T265_00509 Opisthorchis viverrini T265_00509 I
TASK_0000909001 Taenia asiatica TASK_0000909001 I
tetur20g03427 Tetranychus urticae tetur20g03427 I
TsM_001101500 Taenia solium TsM_001101500 I
TTAC_0000304201 Hydatigera taeniaeformis TTAC_0000304201 I
WBGene00238595 Onchocerca volvulus WBGene00238595 I
dnmt1.S Xenopus laevis XB-GENE-17332488 I
emx2 Xenopus tropicalis XB-GENE-481028 I
emx2.L Xenopus laevis XB-GENE-865434 I
emx1 Xenopus tropicalis XB-GENE-876649 I
dnmt1 Xenopus tropicalis XB-GENE-965562 I
dnmt1.L Xenopus laevis XB-GENE-965566 I