CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHSY_002600
(
Pseudozyma hubeiensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PHSY_002600
T331953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GAC95025
Sox
174
242
PKRPPSAYLLFQNEVREEIRKKHPGMPYSEVLGKVSEAWKALTDEQRRVYQDKTTENMATWNQQKKDHE
Links
Other
Sox
family TFs
Other
Pseudozyma hubeiensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_014_00805
Aquilegia coerulea
Aquca_014_00805
N
0.000
SIGD
Arabidopsis thaliana
AT5G13730
N
0.000
Bo2g011520
Brassica oleracea
Bo2g011520
N
0.000
Bo9g166510
Brassica oleracea
Bo9g166510
N
0.000
Bostr.2902s0107
Boechera stricta
Bostr.2902s0107
N
0.000
Bra008807
Brassica rapa
Bra008807
N
0.000
Bra023430
Brassica rapa
Bra023430
N
0.000
Cagra.0596s0063
Capsella grandiflora
Cagra.0596s0063
N
0.000
Carubv10001054m.g
Capsella rubella
Carubv10001054m.g
N
0.000
Ciclev10033747m.g
Citrus clementina
Ciclev10033747m.g
N
0.000
Cucsa.248920
Cucumis sativus
Cucsa.248920
N
0.000
evm.TU.supercontig_125.39
Carica papaya
evm.TU.supercontig_125.39
N
0.000
gene29494-v1.0-hybrid
Fragaria vesca
gene29494-v1.0-hybrid
N
0.000
MDP0000235160
Malus domestica
MDP0000235160
N
0.000
MDP0000266956
Malus domestica
MDP0000266956
N
0.000
mgf003626m
Mimulus guttatus
mgf003626m
N
0.000
orange1.1g046578m.g
Citrus sinensis
orange1.1g046578m.g
N
0.000
PDK_20s1385451g001
Phoenix dactylifera
PDK_20s1385451g001
N
0.000
PGSC0003DMG402006783
Solanum tuberosum
PGSC0003DMG402006783
N
0.000
Pm016510
Prunus mume
Pm016510
N
0.000
PRUPE_ppa017025mg
Prunus persica
PRUPE_ppa017025mg
N
0.000
Thhalv10013654m.g
Eutrema salsugineum
Thhalv10013654m.g
N
0.000
SIG4
Vitis vinifera
VIT_13s0064g00190
N
0.000