PLICRDRAFT_179042 (Plicaturopsis crispa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PLICRDRAFT_179042 T332084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
INO
M02485_2.00 		Arabidopsis thaliana
NHNNNYRNNN
NNNYRNNNDN		 PBM
Weirauch et al.(2014)
pTH7516 		0.515 0.375
YAB5
M02486_2.00 		Arabidopsis thaliana
NNNNHRN
NYDNNNN		 PBM
Weirauch et al.(2014)
pTH7575 		0.477 0.333
YAB5
M00889_2.00 		Arabidopsis thaliana
NATRATTADNNN
NNNHTAATYATN		 PBM
Franco-Zorrilla et al.(2014)
YAB5 		0.477 0.333
YAB1
M00890_2.00 		Arabidopsis thaliana
AATAATWA
TWATTATT		 PBM
Franco-Zorrilla et al.(2014)
YAB1 		0.477 0.333
CRC
M07266_2.00 		Arabidopsis thaliana
TWATCATW
WATGATWA		 Dap-seq
OMalley et al.(2016)
CRC_col_a 		0.441 0.312
CRC
M07267_2.00 		Arabidopsis thaliana
GGTTAGTGTTTTGGAGTCGAATATGACTTG
CAAGTCATATTCGACTCCAAAACACTAACC		 Dap-seq
OMalley et al.(2016)
CRC_colamp_a 		0.441 0.312
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KII85316 Sox 30 77

Links

Other Sox family TFs
Other Plicaturopsis crispa TFs

527 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003929 Calypte anna Aan_R003929 I
Aan_R015392 Calypte anna Aan_R015392 I
Afo_R002224 Aptenodytes forsteri Afo_R002224 I
Afo_R015752 Aptenodytes forsteri Afo_R015752 I
Alligator_sinensis_CCG001309.1 Alligator sinensis Alligator_sinensis_CCG001309.1 I
Alligator_sinensis_CCG017491.1 Alligator sinensis Alligator_sinensis_CCG017491.1 I
Brh_R008046 Buceros rhinoceros Brh_R008046 I
Brh_R012523 Buceros rhinoceros Brh_R012523 I
CapteG30011 Capitella teleta CapteG30011 I
Cmyd_10010871 Chelonia mydas Cmyd_10010871 I
D915_00578 Fasciola hepatica D915_00578 I
DAPPUDRAFT_312628 Daphnia pulex DAPPUDRAFT_312628 I
KLF11 Anolis carolinensis ENSACAG00000000128 I
KLF10 Anolis carolinensis ENSACAG00000009177 I
ENSAMEG00000011355 Ailuropoda melanoleuca ENSAMEG00000011355 I
ENSAMEG00000014775 Ailuropoda melanoleuca ENSAMEG00000014775 I
ENSAMXG00000011768 Astyanax mexicanus ENSAMXG00000011768 I
ENSAPLG00000004145 Anas platyrhynchos ENSAPLG00000004145 I
ENSAPLG00000009146 Anas platyrhynchos ENSAPLG00000009146 I
KLF10 Bos taurus ENSBTAG00000014396 I
KLF11 Bos taurus ENSBTAG00000046218 I
ENSBTAP00000019142-D1 Bos grunniens ENSBTAP00000019142-D1 I
KLF10 Canis familiaris ENSCAFG00000000638 I
KLF11 Canis familiaris ENSCAFG00000003405 I
KLF10 Callithrix jacchus ENSCJAG00000016069 I
KLF10 Cavia porcellus ENSCPOG00000011105 I
KLF11 Cavia porcellus ENSCPOG00000025767 I
ENSCSAG00000007163 Chlorocebus sabaeus ENSCSAG00000007163 I
ENSCSAG00000011934 Chlorocebus sabaeus ENSCSAG00000011934 I
ENSCSAVG00000009024 Ciona savignyi ENSCSAVG00000009024 I
klf11b Danio rerio ENSDARG00000013794 I
klf11a Danio rerio ENSDARG00000030844 I
KLF10 Dasypus novemcinctus ENSDNOG00000017020 I
KLF11 Dasypus novemcinctus ENSDNOG00000035689 I
ENSDORG00000012974 Dipodomys ordii ENSDORG00000012974 I
Klf10 Dipodomys ordii ENSDORG00000015269 I
KLF10 Equus caballus ENSECAG00000013153 I
KLF11 Equus caballus ENSECAG00000015820 I
KLF11 Erinaceus europaeus ENSEEUG00000006894 I
KLF10 Erinaceus europaeus ENSEEUG00000009077 I
KLF11 Echinops telfairi ENSETEG00000002915 I
KLF10 Echinops telfairi ENSETEG00000016283 I
ENSFALG00000005917 Ficedula albicollis ENSFALG00000005917 I
ENSFALG00000006648 Ficedula albicollis ENSFALG00000006648 I
KLF10 Felis catus ENSFCAG00000026958 I
KLF11 Felis catus ENSFCAG00000030965 I
KLF10 Homo sapiens ENSG00000155090 D
KLF11 Homo sapiens ENSG00000172059 D
KLF11 Gasterosteus aculeatus ENSGACG00000001487 I
KLF10 Gasterosteus aculeatus ENSGACG00000004632 I
KLF11 Gasterosteus aculeatus ENSGACG00000008836 I
ENSGALG00000016063 Gallus gallus ENSGALG00000016063 I
KLF11 Gallus gallus ENSGALG00000016440 I
KLF11 Gorilla gorilla ENSGGOG00000012494 I
KLF10 Gorilla gorilla ENSGGOG00000015206 I
ENSGMOG00000003463 Gadus morhua ENSGMOG00000003463 I
ENSGMOG00000011144 Gadus morhua ENSGMOG00000011144 I
ENSLACG00000010260 Latimeria chalumnae ENSLACG00000010260 I
ENSLACG00000013560 Latimeria chalumnae ENSLACG00000013560 I
KLF10 Loxodonta africana ENSLAFG00000000037 I
KLF11 Loxodonta africana ENSLAFG00000032182 I
ENSLOCG00000006468 Lepisosteus oculatus ENSLOCG00000006468 I
ENSLOCG00000016837 Lepisosteus oculatus ENSLOCG00000016837 I
ENSMEUG00000000662 Macropus eugenii ENSMEUG00000000662 I
ENSMEUG00000015111 Macropus eugenii ENSMEUG00000015111 I
KLF10 Meleagris gallopavo ENSMGAG00000012319 I
KLF11 Meleagris gallopavo ENSMGAG00000014008 I
ENSMICG00000002285 Microcebus murinus ENSMICG00000002285 I
KLF11 Myotis lucifugus ENSMLUG00000002295 I
KLF10 Myotis lucifugus ENSMLUG00000012969 I
KLF11 Macaca mulatta ENSMMUG00000002054 I
KLF10 Macaca mulatta ENSMMUG00000018815 I
KLF10 Monodelphis domestica ENSMODG00000005896 I
KLF11 Monodelphis domestica ENSMODG00000014758 I
ENSMPUG00000013287 Mustela putorius furo ENSMPUG00000013287 I
ENSMPUG00000015132 Mustela putorius furo ENSMPUG00000015132 I
Klf11 Mus musculus ENSMUSG00000020653 I
Klf10 Mus musculus ENSMUSG00000037465 I
ENSNLEG00000003646 Nomascus leucogenys ENSNLEG00000003646 I
ENSNLEG00000013701 Nomascus leucogenys ENSNLEG00000013701 I
KLF11 Ornithorhynchus anatinus ENSOANG00000007790 I
KLF10 Ornithorhynchus anatinus ENSOANG00000013800 I
ENSOARG00000015319 Ovis aries ENSOARG00000015319 I
ENSOARG00000017131 Ovis aries ENSOARG00000017131 I
KLF11 Oryctolagus cuniculus ENSOCUG00000003809 I
KLF10 Oryctolagus cuniculus ENSOCUG00000016141 I
KLF10 Otolemur garnettii ENSOGAG00000014528 I
KLF11 Otolemur garnettii ENSOGAG00000026035 I
ENSONIG00000003704 Oreochromis niloticus ENSONIG00000003704 I
ENSONIG00000016428 Oreochromis niloticus ENSONIG00000016428 I
ENSONIG00000018808 Oreochromis niloticus ENSONIG00000018808 I
KLF10 Ochotona princeps ENSOPRG00000006656 I
KLF11 Ochotona princeps ENSOPRG00000013425 I
KLF11 Oryzias latipes ENSORLG00000015191 I
KLF11 Oryzias latipes ENSORLG00000018102 I
ENSP00000285407 Macaca fascicularis ENSP00000285407 I
ENSP00000307023 Macaca fascicularis ENSP00000307023 I
ENSP00000307023-D1 Bos grunniens ENSP00000307023-D1 I
ENSPANG00000008644 Papio anubis ENSPANG00000008644 I
ENSPANG00000009227 Papio anubis ENSPANG00000009227 I
KLF11 Procavia capensis ENSPCAG00000011366 I
ENSPFOG00000005130 Poecilia formosa ENSPFOG00000005130 I
ENSPFOG00000013334 Poecilia formosa ENSPFOG00000013334 I
ENSPFOG00000015744 Poecilia formosa ENSPFOG00000015744 I
ENSPMAG00000001515 Petromyzon marinus ENSPMAG00000001515 I
ENSPPYG00000012659 Pongo abelii ENSPPYG00000012659 I
ENSPPYG00000018800 Pongo abelii ENSPPYG00000018800 I
ENSPSIG00000010816 Pelodiscus sinensis ENSPSIG00000010816 I
ENSPSIG00000012678 Pelodiscus sinensis ENSPSIG00000012678 I
KLF11 Pan troglodytes ENSPTRG00000011645 I
KLF10 Pan troglodytes ENSPTRG00000020484 I
KLF10 Pteropus vampyrus ENSPVAG00000013271 I
KLF11 Pteropus vampyrus ENSPVAG00000017463 I
Klf10 Rattus norvegicus ENSRNOG00000006118 I
Klf11 Rattus norvegicus ENSRNOG00000054259 I
KLF11 Sorex araneus ENSSARG00000004298 I
ENSSHAG00000005846 Sarcophilus harrisii ENSSHAG00000005846 I
ENSSHAG00000018290 Sarcophilus harrisii ENSSHAG00000018290 I
KLF10 Sus scrofa ENSSSCG00000027480 I
ENSSSCG00000027819 Sus scrofa ENSSSCG00000027819 I
ENSSTOG00000002442 Ictidomys tridecemlineatus ENSSTOG00000002442 I
ENSSTOG00000027022 Ictidomys tridecemlineatus ENSSTOG00000027022 I
KLF11 Tupaia belangeri ENSTBEG00000008268 I
KLF10 Taeniopygia guttata ENSTGUG00000012120 I
KLF11 Taeniopygia guttata ENSTGUG00000013041 I
KLF11 Tetraodon nigroviridis ENSTNIG00000000881 I
KLF11 Takifugu rubripes ENSTRUG00000008202 I
KLF11 Takifugu rubripes ENSTRUG00000013598 I
ENSTSYG00000003347 Tarsius syrichta ENSTSYG00000003347 I
KLF10 Tursiops truncatus ENSTTRG00000000383 I
KLF11 Tursiops truncatus ENSTTRG00000017207 I
ENSXMAG00000002425 Xiphophorus maculatus ENSXMAG00000002425 I
ENSXMAG00000009885 Xiphophorus maculatus ENSXMAG00000009885 I
ENSXMAG00000010947 Xiphophorus maculatus ENSXMAG00000010947 I
estExt_fgenesh2_pg.C_5760011 Branchiostoma floridae estExt_fgenesh2_pg.C_5760011 I
GB45040 Apis mellifera GB45040 I
Gfo_R006024 Geospiza fortis Gfo_R006024 I
Gfo_R015265 Geospiza fortis Gfo_R015265 I
ISCW022767 Ixodes scapularis ISCW022767 I
Myotis_brandtii_KLF10_10032162 Myotis brandtii Myotis_brandtii_KLF10_10032162 I
Myotis_brandtii_KLF11_10020832 Myotis brandtii Myotis_brandtii_KLF11_10020832 I
Ogr04283 Ophisaurus gracilis Ogr04283 I
PHUM248360 Pediculus humanus PHUM248360 I
Pvit_03838 Pogona vitticeps Pvit_03838 I
Pvit_14441 Pogona vitticeps Pvit_14441 I
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I
SPU_026418 Strongylocentrotus purpuratus SPU_026418 I
Tal_R007530 Tyto alba Tal_R007530 I
Tal_R013154 Tyto alba Tal_R013154 I
tetur19g01530 Tetranychus urticae tetur19g01530 I
TriadG27838 Trichoplax adhaerens TriadG27838 I
klf10.L Xenopus laevis XB-GENE-17335049 I
klf11.S Xenopus laevis XB-GENE-17345045 I
klf10 Xenopus tropicalis XB-GENE-854761 I
klf10.S Xenopus laevis XB-GENE-866571 I
klf11 Xenopus tropicalis XB-GENE-956858 I
klf11.L Xenopus laevis XB-GENE-956865 I