CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA24751
(
Pristionchus pacificus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PPA24751
T332191_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA24751
Sox
187
249
DKATKAAVLYVNMSFPRLREQMPEWSERAKFIHKTWRSLSSEDRQTYVQKARFNRAQREKVPR
Links
Other
Sox
family TFs
Other
Pristionchus pacificus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000640901
Anisakis simplex
ASIM_0000640901
N
0.430
ASIM_0000652001
Anisakis simplex
ASIM_0000652001
N
0.430
GPUH_0002165401
Gongylonema pulchrum
GPUH_0002165401
N
0.430
L596_g18998
Steinernema carpocapsae
L596_g18998
N
0.548
L889_g16824
Steinernema feltiae
L889_g16824
N
0.617
L892_g28062
Steinernema scapterisci
L892_g28062
N
0.548
L893_g8502
Steinernema glaseri
L893_g8502
N
0.549
RSKR_0000923100
Rhabditophanes kr3021
RSKR_0000923100
N
0.471