CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002165401
(
Gongylonema pulchrum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
GPUH_0002165401
T336374_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002165401-mRNA-1
Sox
120
183
ERATKAAVLYANINYPEWKEQYPEWPERVKHIHRMWRSLDANSRQQYVNKARENRANRVKQPRA
Links
Other
Sox
family TFs
Other
Gongylonema pulchrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0000640901
Anisakis simplex
ASIM_0000640901
N
0.672
ASIM_0000652001
Anisakis simplex
ASIM_0000652001
N
0.672
DME_0001058101
Dracunculus medinensis
DME_0001058101
N
0.616
EVEC_0000369701
Enterobius vermicularis
EVEC_0000369701
N
0.555
ACAC_0000570501
Angiostrongylus cantonensis
ACAC_0000570501
N
0.519
L889_g16824
Steinernema feltiae
L889_g16824
N
0.497
SMUV_0000902401
Syphacia muris
SMUV_0000902401
N
0.486
L596_g18998
Steinernema carpocapsae
L596_g18998
N
0.451
L892_g28062
Steinernema scapterisci
L892_g28062
N
0.451
CBN03428
Caenorhabditis brenneri
CBN03428
N
0.440
PPA24751
Pristionchus pacificus
PPA24751
N
0.430