SELMODRAFT_18312 (Selaginella moellendorffii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SELMODRAFT_18312 T332499_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.490 0.580
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ19217 Sox 13 82

Links

Other Sox family TFs
Other Selaginella moellendorffii TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G55690 Arabidopsis thaliana AT5G55690 N
AGL82 Arabidopsis thaliana AT5G58890 N
Bo3g021400 Brassica oleracea Bo3g021400 N
Bostr.26833s0688 Boechera stricta Bostr.26833s0688 N
Bra002611 Brassica rapa Bra002611 N
Bra028965 Brassica rapa Bra028965 N
Cagra.0891s0086 Capsella grandiflora Cagra.0891s0086 N
Carubv10027564m.g Capsella rubella Carubv10027564m.g N
Carubv10027979m.g Capsella rubella Carubv10027979m.g N
fgenesh1_pg.C_scaffold_8001596 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001596 N
AGL82 Arabidopsis lyrata scaffold_802501.1 N
Thhalv10015661m.g Eutrema salsugineum Thhalv10015661m.g N