SNOG_06805 (Phaeosphaeria nodorum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SNOG_06805 T332669_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.624 0.522
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.494 0.348
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.494 0.348
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.484 0.304
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.484 0.304
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNOT_06805 Sox 101 169

Links

Other Sox family TFs
Other Phaeosphaeria nodorum TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF4 Arabidopsis thaliana AT3G15210 D
ERF7 Arabidopsis thaliana AT3G20310 D
Bo1g108970 Brassica oleracea Bo1g108970 I
Bo3g074840 Brassica oleracea Bo3g074840 I
Bo5g109800 Brassica oleracea Bo5g109800 I
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I
Bra001784 Brassica rapa Bra001784 I
Bra018864 Brassica rapa Bra018864 I
Bra035792 Brassica rapa Bra035792 I
Bra038261 Brassica rapa Bra038261 I
BRADI3G04410 Brachypodium distachyon BRADI3G04410 I
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I
Carubv10014475m.g Capsella rubella Carubv10014475m.g I
cassava34729.m1 Manihot esculenta cassava34729.m1 I
Ca_20544 Cicer arietinum Ca_20544 I
Eucgr.K00734 Eucalyptus grandis Eucgr.K00734 I
ATERF-7 Arabidopsis lyrata fgenesh2_kg.3__2255__AT3G20310.1 I
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I
GLYMA02G46340 Glycine max GLYMA02G46340 I
GLYMA06G44430 Glycine max GLYMA06G44430 I
GLYMA08G43300 Glycine max GLYMA08G43300 I
GLYMA12G13315 Glycine max GLYMA12G13315 I
GLYMA14G02360 Glycine max GLYMA14G02360 I
GLYMA18G10290 Glycine max GLYMA18G10290 I
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I
GRMZM2G020150 Zea mays GRMZM2G020150 I
GRMZM2G079653 Zea mays GRMZM2G079653 I
GRMZM2G146028 Zea mays GRMZM2G146028 I
GRMZM2G174347 Zea mays GRMZM2G174347 I
GRMZM2G175543 Zea mays GRMZM2G175543 N
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I
LPERR02G03850 Leersia perrieri LPERR02G03850 N
LPERR02G05920 Leersia perrieri LPERR02G05920 I
LPERR06G21240 Leersia perrieri LPERR06G21240 N
MTR_3g053690 Medicago truncatula MTR_3g053690 I
OBART06G25530 Oryza barthii OBART06G25530 N
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N
OMERI02G07840 Oryza meridionalis OMERI02G07840 I
OMERI06G25700 Oryza meridionalis OMERI06G25700 N
ONIVA02G04420 Oryza nivara ONIVA02G04420 N
ONIVA06G28540 Oryza nivara ONIVA06G28540 N
OPUNC02G05940 Oryza punctata OPUNC02G05940 I
OPUNC06G23160 Oryza punctata OPUNC06G23160 N
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N
OS06G0691100 Oryza sativa OS06G0691100 N
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I
Sb04g006080 Sorghum bicolor Sb04g006080 I
Sb10g028110 Sorghum bicolor Sb10g028110 N
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I
SELMODRAFT_129122 Selaginella moellendorffii SELMODRAFT_129122 I
SELMODRAFT_17648 Selaginella moellendorffii SELMODRAFT_17648 I
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I