BRADI3G04410 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G04410 T001317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.684 0.740
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.684 0.740
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.684 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G04410.1 AP2 21 72

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G33550 Brachypodium distachyon BRADI1G33550 I 0.762
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.701
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.697
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.697
ONIVA02G04420 Oryza nivara ONIVA02G04420 N 0.697
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.697
Bra018864 Brassica rapa Bra018864 I 0.694
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.694
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.692
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.691
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N 0.691
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.689
ERF7 Arabidopsis thaliana AT3G20310 D 0.684
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.684
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.684
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.684
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.684
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.683
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.680
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.680
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.680
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.679
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.679
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.679
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.679
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.678
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.678
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.677
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.677