CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps10374
(
Thalassiosira pseudonana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Thaps10374
T332903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps10374
Sox
81
136
RKKRQDHVNHGIITFHDLTKTISHNWNTADLETRMYCKDLAEMELTRYHRDLSAYR
Links
Other
Sox
family TFs
Other
Thalassiosira pseudonana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F503_03966
Ophiostoma piceae uamh
F503_03966
N
FFUJ_06792
Fusarium fujikuroi
FFUJ_06792
N
fgenesh1_pm.sca_44_chr3_2_0000059
Nectria haematococca
fgenesh1_pm.sca_44_chr3_2_0000059
N
FGRRES_17430
Fusarium graminearum
FGRRES_17430
N
FOXG_04795
Fusarium oxysporum
FOXG_04795
N
FVEG_03338
Fusarium verticillioides
FVEG_03338
N
NechaG91591
Fusarium solani
NechaG91591
N
TRIATDRAFT_129946
Trichoderma atroviride
TRIATDRAFT_129946
N
VDAG_03890
Verticillium dahliae
VDAG_03890
N
VDBG_02982
Verticillium albo atrum
VDBG_02982
N
VDBG_02982
Verticillium alfalfae
VDBG_02982
N