CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_02982
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_02982
T357972_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_02982T0
Zinc cluster
17
55
RDCRACKTRGIKCDLNRPRCQPCVASELPCGGYPQRVVW
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_03890
Verticillium dahliae
VDAG_03890
N
0.683
VDBG_02982
Verticillium alfalfae
VDBG_02982
N
0.683
TRIATDRAFT_129946
Trichoderma atroviride
TRIATDRAFT_129946
N
0.564
TRIREDRAFT_70351
Trichoderma reesei
TRIREDRAFT_70351
N
0.560
FGRRES_17430
Fusarium graminearum
FGRRES_17430
N
0.559
NechaG91591
Fusarium solani
NechaG91591
N
0.559
fgenesh1_pm.sca_44_chr3_2_0000059
Nectria haematococca
fgenesh1_pm.sca_44_chr3_2_0000059
N
0.559
PMAA_017320
Talaromyces marneffei
PMAA_017320
N
0.554
PMAA_017320
Penicillium marneffei
PMAA_017320
N
0.554
FPSE_05701
Fusarium pseudograminearum
FPSE_05701
N
0.551
TRIVIDRAFT_39606
Trichoderma virens
TRIVIDRAFT_39606
N
0.539