hmg-1.2 (Caenorhabditis elegans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 WBGene00001972 T333268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F47D12.4a.1 Sox 47 113
F47D12.4a.1 Sox 135 203
F47D12.4a.2 Sox 47 113
F47D12.4a.2 Sox 135 203
F47D12.4b Sox 46 112
F47D12.4b Sox 134 202
F47D12.4c.1 Sox 47 115
F47D12.4c.1 Sox 133 201
F47D12.4c.2 Sox 47 115
F47D12.4c.2 Sox 133 201

Links

Other Sox family TFs
Other Caenorhabditis elegans TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA003819 Oryza indica BGIOSGA003819 N
BGIOSGA003821 Oryza indica BGIOSGA003821 N
BGIOSGA014565 Oryza indica BGIOSGA014565 N
BGIOSGA014566 Oryza indica BGIOSGA014566 N
BGIOSGA014567 Oryza indica BGIOSGA014567 N
BGIOSGA015472 Oryza indica BGIOSGA015472 N
F775_10624 Aegilops tauschii F775_10624 N
F775_18830 Aegilops tauschii F775_18830 N
F775_19744 Aegilops tauschii F775_19744 N
GRMZM2G172795 Zea mays GRMZM2G172795 I
LPERR04G17380 Leersia perrieri LPERR04G17380 N
LPERR04G17400 Leersia perrieri LPERR04G17400 I
LPERR08G11070 Leersia perrieri LPERR08G11070 N
MLOC_38470 Hordeum vulgare MLOC_38470 N
OB01G30110 Oryza brachyantha OB01G30110 N
OB04G28350 Oryza brachyantha OB04G28350 N
OB04G28380 Oryza brachyantha OB04G28380 N
OB04G28390 Oryza brachyantha OB04G28390 N
OBART01G20350 Oryza barthii OBART01G20350 N
OBART04G21320 Oryza barthii OBART04G21320 N
OBART04G21370 Oryza barthii OBART04G21370 N
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N
OLONG_009946 Oryza longistaminata OLONG_009946 N
OLONG_016958 Oryza longistaminata OLONG_016958 N
OLONG_016960 Oryza longistaminata OLONG_016960 N
OMERI01G18770 Oryza meridionalis OMERI01G18770 N
OMERI04G17790 Oryza meridionalis OMERI04G17790 N
OMERI04G17820 Oryza meridionalis OMERI04G17820 N
ONIVA01G22980 Oryza nivara ONIVA01G22980 N
ONIVA04G19650 Oryza nivara ONIVA04G19650 N
ONIVA04G19860 Oryza nivara ONIVA04G19860 N
OPUNC04G19030 Oryza punctata OPUNC04G19030 N
OPUNC04G19040 Oryza punctata OPUNC04G19040 N
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N
OS04G0557200 Oryza sativa OS04G0557200 N
OS04G0557800 Oryza sativa OS04G0557800 N
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N
Pavir.J34298 Panicum virgatum Pavir.J34298 N
Sb06g025040 Sorghum bicolor Sb06g025040 I
Sb06g025060 Sorghum bicolor Sb06g025060 I
Si000845m.g Setaria italica Si000845m.g I
Si012401m.g Setaria italica Si012401m.g I
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N
TRIUR3_18279 Triticum urartu TRIUR3_18279 N
TRIUR3_26157 Triticum urartu TRIUR3_26157 N
TRIUR3_35186 Triticum urartu TRIUR3_35186 N