Brh_R011859 (Buceros rhinoceros)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Brh_R011859 T333585_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.555 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R011859 Sox 104 172

Links

Other Sox family TFs
Other Buceros rhinoceros TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_07945 Cladophialophora psammophila A1O5_07945 N
A1O7_05540 Cladophialophora yegresii A1O7_05540 N
A1O9_03728 Exophiala aquamarina A1O9_03728 N
AB01725.1 Alternaria brassicicola AB01725.1 N
AUEXF2481DRAFT_674882 Aureobasidium subglaciale AUEXF2481DRAFT_674882 N
BBA_01486 Beauveria bassiana BBA_01486 N
ACLA_069820 Aspergillus clavatus CADACLAG00007039 N
CADAFLAG00005698 Aspergillus flavus CADAFLAG00005698 N
AFUA_2G10850 Aspergillus fumigatus CADAFUAG00004240 N
CADANGAG00001782 Aspergillus niger CADANGAG00001782 N
ANIA_05924 Aspergillus nidulans CADANIAG00007107 N
ATEG_01494 Aspergillus terreus CADATEAG00001577 N
NFIA_086160 Neosartorya fischeri CADNFIAG00006888 N
CCM_05346 Cordyceps militaris CCM_05346 N
COCC4DRAFT_151267 Bipolaris maydis COCC4DRAFT_151267 N
COCCADRAFT_88870 Bipolaris zeicola COCCADRAFT_88870 N
COCMIDRAFT_99367 Bipolaris oryzae COCMIDRAFT_99367 N
COCSADRAFT_312964 Bipolaris sorokiniana COCSADRAFT_312964 N
COCVIDRAFT_40098 Bipolaris victoriae COCVIDRAFT_40098 N
EURHEDRAFT_450545 Aspergillus ruber EURHEDRAFT_450545 N
e_gw1.3.249.1 Cryphonectria parasitica e_gw1.3.249.1 N
fgenesh1_pg.00866_#_308 Aspergillus carbonarius fgenesh1_pg.00866_#_308 N
G647_09706 Cladophialophora carrionii G647_09706 N
GMDG_04003 Pseudogymnoascus destructans GMDG_04003 N
GSTUM_00000679001 Tuber melanosporum GSTUM_00000679001 N
HMPREF1120_01168 Exophiala dermatitidis HMPREF1120_01168 N
HMPREF1541_01199 Cyphellophora europaea HMPREF1541_01199 N
M437DRAFT_45546 Aureobasidium melanogenum M437DRAFT_45546 I
M438DRAFT_281522 Aureobasidium pullulans M438DRAFT_281522 I
Pc22g21140 Penicillium chrysogenum Pc22g21140 N
PDE_03860 Penicillium oxalicum PDE_03860 N
PDIP_63820 Penicillium digitatum PDIP_63820 N
PITC_004270 Penicillium italicum PITC_004270 N
PV04_05906 Capronia semiimmersa PV04_05906 N
PV05_04590 Exophiala xenobiotica PV05_04590 N
PV06_01163 Exophiala oligosperma PV06_01163 N
PV07_04349 Cladophialophora immunda PV07_04349 N
PV10_06983 Exophiala mesophila PV10_06983 N
SETTUDRAFT_155086 Setosphaeria turcica SETTUDRAFT_155086 N
U727_00431202221 Penicillium solitum U727_00431202221 N
V499_03492 Pseudogymnoascus pannorum V499_03492 N
VHEMI03538 Torrubiella hemipterigena VHEMI03538 N
Z517_04112 Fonsecaea pedrosoi Z517_04112 N
Z518_08281 Rhinocladiella mackenziei Z518_08281 N
Z519_07787 Cladophialophora bantiana Z519_07787 N