CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.53__64
(
Phycomyces blakesleeanus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
fgeneshPB_pg.53__64
T334217_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.53__64
Sox
142
211
PKGPGNPFFLYCRMERDRIKEESDHDMNLGEMTRILGQEWKSLEPKEKQKYLDLFKKEHDEYEEALRSYT
Links
Other
Sox
family TFs
Other
Phycomyces blakesleeanus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Brh_R000694
Buceros rhinoceros
Brh_R000694
N
ENSFALG00000008614
Ficedula albicollis
ENSFALG00000008614
N
Gfo_R003548
Geospiza fortis
Gfo_R003548
N
Tal_R002098
Tyto alba
Tal_R002098
N