Lus10013219.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10013219.g T334562_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10013219 Sox 38 68
Lus10013219 Sox 63 92

Links

Other Sox family TFs
Other Linum usitatissimum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008717 Ricinus communis 30174.m008717 I 0.000
Ca_06612 Cicer arietinum Ca_06612 I 0.000
Ca_19000 Cicer arietinum Ca_19000 I 0.000
chr4.LjB15O07.50.nc Lotus japonicus chr4.LjB15O07.50.nc I 0.000
Ciclev10021342m.g Citrus clementina Ciclev10021342m.g I 0.000
Cla019277 Citrullus lanatus Cla019277 I 0.000
Cucsa.198920 Cucumis sativus Cucsa.198920 I 0.000
Eucgr.K02659 Eucalyptus grandis Eucgr.K02659 I 0.000
gene26214-v1.0-hybrid Fragaria vesca gene26214-v1.0-hybrid I 0.000
GLYMA05G07980 Glycine max GLYMA05G07980 I 0.000
GLYMA17G13010 Glycine max GLYMA17G13010 I 0.000
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I 0.000
MDP0000241185 Malus domestica MDP0000241185 N 0.000
MTR_4g111975 Medicago truncatula MTR_4g111975 I 0.000
PK19621.1 Cannabis sativa PK19621.1 D 0.000
Pm030197 Prunus mume Pm030197 I 0.000
POPTR_0012s05720 Populus trichocarpa POPTR_0012s05720 I 0.000
PRUPE_ppa009092mg Prunus persica PRUPE_ppa009092mg I 0.000
SapurV1A.0583s0020 Salix purpurea SapurV1A.0583s0020 I 0.000
Solyc03g119740.2 Solanum lycopersicum Solyc03g119740.2 I 0.000
TCM_012262 Theobroma cacao TCM_012262 I 0.000
Thhalv10011650m.g Eutrema salsugineum Thhalv10011650m.g I 0.000