CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000699531
(
Malus domestica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
MDP0000699531
T334625_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000699531
Sox
122
152
PKRPLTAFFLFLDDFRKSYKEANPDSKGVKM
MDP0000699531
Sox
150
174
VKMEKKPYVDKAAELKQEYKRALES
Links
Other
Sox
family TFs
Other
Malus domestica
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H101_07765
Trichophyton interdigitale
H101_07765
N
0.000
H102_00975
Trichophyton rubrum
H102_00975
N
0.000
H105_00981
Trichophyton soudanense
H105_00981
N
0.000
MCYG_00422
Microsporum canis
MCYG_00422
N
0.000
MGYG_01541
Microsporum gypseum
MGYG_01541
N
0.000
TEQG_03646
Trichophyton equinum
TEQG_03646
N
0.000