MDP0000699531 (Malus domestica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 MDP0000699531 T334625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000699531 Sox 122 152
MDP0000699531 Sox 150 174

Links

Other Sox family TFs
Other Malus domestica TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla010647 Citrullus lanatus Cla010647 N 0.605
Bra012832 Brassica rapa Bra012832 N 0.597
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.588
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.581
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.581
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.573
Ca_10726 Cicer arietinum Ca_10726 N 0.544
Pm010381 Prunus mume Pm010381 N 0.544
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.541
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.523
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.501
OBART09G18880 Oryza barthii OBART09G18880 N 0.501
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.501
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.501
SCHCODRAFT_105718 Schizophyllum commune SCHCODRAFT_105718 N 0.493
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.486
HelroG178674 Helobdella robusta HelroG178674 N 0.485
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.477
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.470
Bo6g005800 Brassica oleracea Bo6g005800 N 0.468
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.463
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.463
D917_04157 Trichinella nativa D917_04157 N 0.445
BGIBMGA006156 Bombyx mori BGIBMGA006156 N 0.443
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.440
TCF7L2 Tursiops truncatus ENSTTRG00000002360 N 0.439
CLEC004367 Cimex lectularius CLEC004367 N 0.434
SINV25043 Solenopsis invicta SINV25043 N 0.433
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.431
MCOS_0000664501 Mesocestoides corti MCOS_0000664501 N 0.427
MAC_03708 Metarhizium acridum MAC_03708 N 0.425
MBR_01289 Metarhizium brunneum MBR_01289 N 0.425
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.424
ASIS002444 Anopheles sinensis ASIS002444 N 0.418
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.417